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Sample GSM926499 Query DataSets for GSM926499
Status Public on May 06, 2012
Title HSCC_Low_713
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 13.3093069862423 10601.2 1784.30539511262 0 37
ILMN_2721178 11.0599765054458 2020.7 505.548859884977 0 51
ILMN_3033922 11.4221806278871 2703.9 667.820886748835 0 42
ILMN_3092673 13.2122439364894 9999.3 2336.62220608275 0 39
ILMN_2816356 9.26239417363535 395 85.3116954819209 0.06015 26
ILMN_2808939 10.9252390521253 1821.4 635.724851095189 0 47
ILMN_2634564 10.4837385278938 1265.1 511.175027805545 0 28
ILMN_2737647 9.31378797856355 418.1 146.292820876487 0.00752 35
ILMN_2734484 11.7293240082764 3396.4 1103.31311249708 0 52
ILMN_2952292 9.40938061716386 462.8 138.97097440473 0.00251 47
ILMN_2699078 9.27263329358851 399.3 89.0687125763026 0.04887 40
ILMN_1213681 10.1187816561718 920.6 294.347530268219 0 47
ILMN_2735413 9.18781768191093 363.3 139.629117246368 0.23935 47
ILMN_2735415 9.28432021187191 404.2 121.116622001276 0.03634 45
ILMN_2891688 11.4479204293405 2760.7 743.933592281596 0 29
ILMN_2637698 11.4954876974229 2861 732.357214531952 0 53
ILMN_2674228 10.0495859745388 865.9 326.178334577881 0 47
ILMN_2601546 9.17913111315642 359.4 119.856 0.27068 36
ILMN_1230831 9.25002984279216 389.7 154.879507585736 0.07644 30
ILMN_2848071 9.25414233494868 391.5 100.939790122627 0.07143 30

Total number of rows: 25697

Table truncated, full table size 1522 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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