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Sample GSM926502 Query DataSets for GSM926502
Status Public on May 06, 2012
Title HSCC_Low_669
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.7864561959115 19079.2 4016.29234610729 0 46
ILMN_2721178 10.7577059389109 3905.3 993.195003592446 0 41
ILMN_3033922 11.3541031738508 6495.6 1551.68667800558 0 43
ILMN_3092673 13.269400357655 25574.2 8053.06348721404 0 44
ILMN_2816356 9.23294529380538 533.3 163.104078575614 0.09524 32
ILMN_2808939 11.055612078508 5066 1438.86531101698 0 37
ILMN_2634564 10.3547956516047 2673.9 901.176479923883 0 32
ILMN_2737647 9.27202640115452 583.7 185.407079967298 0.0401 38
ILMN_2734484 11.432079519521 6888.3 2170.15573883535 0 48
ILMN_2952292 9.43715847251919 805.2 172.30345294857 0.00125 42
ILMN_2699078 9.23746749529808 539 167.18199308538 0.08271 47
ILMN_1213681 9.85682113922162 1505.2 539.366125365693 0 42
ILMN_2735413 9.18138672100319 473.6 186.823268443735 0.22055 32
ILMN_2735415 9.21321579385471 509.7 181.343974700016 0.13784 40
ILMN_2891688 11.118350274298 5329.7 1459.96910749235 0 33
ILMN_2637698 10.6504251452976 3556.6 1013.89199313832 0 38
ILMN_2674228 10.0146829666211 1831.5 623.136179633313 0 42
ILMN_2601546 9.196916057164 490.8 152.204705587574 0.17168 43
ILMN_1230831 9.14712983772451 441.2 133.2 0.39975 25
ILMN_2848071 9.2483991872562 552.9 133.063718120305 0.06266 30

Total number of rows: 25697

Table truncated, full table size 1529 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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