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Sample GSM926503 Query DataSets for GSM926503
Status Public on May 06, 2012
Title HSCC_Low_673
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.8976560006436 8154.1 2488.19825022043 0 44
ILMN_2721178 10.8237927299212 1757.3 621.77073571454 0 39
ILMN_3033922 10.8957471881136 1864.6 669.255355189632 0 50
ILMN_3092673 12.7648376636545 7531.5 1882.74176149147 0 44
ILMN_2816356 9.24174917754574 319.5 137.944181856286 0.07268 28
ILMN_2808939 11.1447493894731 2252 782.649960191017 0 43
ILMN_2634564 10.1904050438193 1002.3 337.010510500785 0 28
ILMN_2737647 9.10292708213574 259.2 93.3267814081253 0.68421 32
ILMN_2734484 11.6221792004848 3287.4 1197.74696344846 0 50
ILMN_2952292 9.28550809243104 342.4 81.9745006206198 0.02632 48
ILMN_2699078 9.04492010596653 237.8 101.618607429939 0.92356 39
ILMN_1213681 9.91152204030865 762.5 284.514 0 36
ILMN_2735413 9.11776978584205 264.8 97.1628541521913 0.61654 27
ILMN_2735415 9.09583798316598 256.5 98.6305513013083 0.7218 34
ILMN_2891688 10.8554084338687 1800.3 735.03639906606 0 43
ILMN_2637698 11.3864283834947 2726.9 919.199313167172 0 47
ILMN_2674228 10.1383678513709 952.5 386.589419410309 0 50
ILMN_2601546 9.24660131640091 321.8 114.957630799351 0.06391 31
ILMN_1230831 9.19840274050554 298.2 111.878984778197 0.198 35
ILMN_2848071 9.18679524285977 293.3 101.75065618953 0.24311 35

Total number of rows: 25697

Table truncated, full table size 1521 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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