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Sample GSM926505 Query DataSets for GSM926505
Status Public on May 06, 2012
Title HSCC_Low_674
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.9617024407542 9080.6 2246.89808201218 0 38
ILMN_2721178 10.9134000871919 2143.9 527.874 0 36
ILMN_3033922 11.2258716107602 2692 699.650837597583 0 31
ILMN_3092673 12.8094652803349 8165.6 2087.36766767429 0 53
ILMN_2816356 9.26917420319579 563.9 138.71834557837 0.04762 34
ILMN_2808939 11.1563102769336 2570.9 794.17793711674 0 43
ILMN_2634564 10.1180920547525 1155.7 275.229496239048 0 21
ILMN_2737647 9.18364314896608 520.2 157.650699728863 0.28195 29
ILMN_2734484 11.5373007822826 3375 1172.04397467842 0 45
ILMN_2952292 9.42811282518959 647.7 220.572559641946 0 43
ILMN_2699078 9.20634733539968 532.1 139.450504929168 0.20677 53
ILMN_1213681 10.0172925048161 1070.3 347.4217286469 0 39
ILMN_2735413 9.09641633824948 471.9 138.36 0.72807 36
ILMN_2735415 9.15816961619539 507.1 198.646976317285 0.40226 33
ILMN_2891688 11.1663987443354 2586.4 672.303400212285 0 33
ILMN_2637698 11.6056320618598 3561.5 909.336501704402 0 37
ILMN_2674228 10.2827787757609 1320.4 533.696758211065 0 29
ILMN_2601546 9.22702454992108 542.5 160.615062705837 0.14411 32
ILMN_1230831 9.19171456100911 524.6 105.947427453431 0.25815 26
ILMN_2848071 9.10453023741837 476.8 116.156310461378 0.69674 35

Total number of rows: 25697

Table truncated, full table size 1521 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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