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GEO accession:
Sample GSM92932
Query DataSets for GSM92932
Status
Public on Jan 28, 2006
Title
41916
Sample type
RNA
Source name
Fat pad of an intact animal treated with estrogen
Organism
Bos taurus
Characteristics
both the raw and normalized values are log 2 based.
Extracted molecule
total RNA
Label
biotin
Description
Single channel hybridization of biotin-labeled samples detected by Cy3-streptavidin staining
Data processing
is based on the SAS Mixed Model
Submission date
Jan 18, 2006
Last update date
May 05, 2006
Contact name
Robert W Li
E-mail(s)
robert.li@ars.usda.gov
Phone
301-504-5185
Fax
301-504-8414
Organization name
USDA
Department
Animal & Natural Resources Institute
Lab
Bovine Functional Genomics Laboratory
Street address
Barc East
City
Beltsville
State/province
MD
ZIP/Postal code
20705
Country
USA
Platform ID
GPL3711
Series (1)
GSE4054
Estrogen-responsive genes in the parenchyma and fat pad of the bovine mammary gland by microarray analysis
Data table header descriptions
ID_REF
VALUE
is the raw value (log2, geometric mean) of the 4 replicate features (spots) for each 60mer oligo
VALUE_Normalized
is the residual value (log2) normalized based on the SAS Mixed model fit across all probes
Data table
ID_REF
VALUE
VALUE_Normalized
BOV00P0000000001
14.8691729103
1.1845770800
BOV00P0000000002
2.8195938258
1.2808982319
BOV00P0000000003
0.3908895404
0.5831735941
BOV00P0000000004
1.0736155419
0.8657038165
BOV00P0000000005
0.9536205344
0.7642303659
BOV00P0000000006
5.9211130542
1.0990988985
BOV00P0000000007
1.3724013583
1.0543646236
BOV00P0000000008
0.8503980875
0.6525638644
BOV00P0000000009
4.2740969562
0.7837780110
BOV00P0000000010
3.3949167210
0.7300788953
BOV00P0000000011
0.3316423161
0.8759360260
BOV00P0000000012
1.5827063092
1.2768336203
BOV00P0000000013
0.8297689473
0.7256837430
BOV00P0000000014
1.7078358931
1.3633476089
BOV00P0000000015
0.6147405847
0.5193548064
BOV00P0000000016
3.6188478476
1.8744924630
BOV00P0000000017
0.8362835015
0.6391416269
BOV00P0000000018
1.6310315920
0.9415523277
BOV00P0000000019
22.1379652689
0.7686467663
BOV00P0000000020
0.7395541317
0.8160548224
Total number of rows:
85203
Table truncated, full table size
3581 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM92932.CEL.gz
5.7 Mb
(ftp)
(http)
CEL
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