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GEO accession:
Sample GSM92942
Query DataSets for GSM92942
Status
Public on Jan 28, 2006
Title
44270
Sample type
RNA
Source name
Fat pad of an intact animal treated with corn oil (control)
Organism
Bos taurus
Characteristics
both the raw and normalized values are log 2 based.
Extracted molecule
total RNA
Label
biotin
Description
Single channel hybridization of biotin-labeled samples detected by Cy3-streptavidin staining
Data processing
is based on the SAS Mixed Model
Submission date
Jan 18, 2006
Last update date
May 05, 2006
Contact name
Robert W Li
E-mail(s)
robert.li@ars.usda.gov
Phone
301-504-5185
Fax
301-504-8414
Organization name
USDA
Department
Animal & Natural Resources Institute
Lab
Bovine Functional Genomics Laboratory
Street address
Barc East
City
Beltsville
State/province
MD
ZIP/Postal code
20705
Country
USA
Platform ID
GPL3711
Series (1)
GSE4054
Estrogen-responsive genes in the parenchyma and fat pad of the bovine mammary gland by microarray analysis
Data table header descriptions
ID_REF
VALUE
is the raw value (log2, geometric mean) of the 4 replicate features (spots) for each 60mer oligo
VALUE_Normalized
is the residual value (log2) normalized based on the SAS Mixed model fit across all probes
Data table
ID_REF
VALUE
VALUE_Normalized
BOV00P0000000001
19.9684534304
1.5825085412
BOV00P0000000002
3.3111348919
1.4963392516
BOV00P0000000003
0.4738360512
0.7032294035
BOV00P0000000004
1.2494980766
1.0022619743
BOV00P0000000005
1.0607403142
0.8456348836
BOV00P0000000006
3.6287402000
0.6700611133
BOV00P0000000007
2.7614795447
2.1104576252
BOV00P0000000008
0.8265627612
0.6309598157
BOV00P0000000009
4.4572235187
0.8130892855
BOV00P0000000010
2.7402622700
0.5862163397
BOV00P0000000011
0.2107922326
0.5538372627
BOV00P0000000012
0.9113247009
0.7313617397
BOV00P0000000013
1.2633422272
1.0990978237
BOV00P0000000014
2.8412772236
2.2563122086
BOV00P0000000015
0.9966547950
0.8376105701
BOV00P0000000016
3.5827388930
1.8460933265
BOV00P0000000017
0.6721064975
0.5109833958
BOV00P0000000018
0.9599987926
0.5512871815
BOV00P0000000019
20.9145792944
0.7223760771
BOV00P0000000020
0.8555065676
0.9390697157
Total number of rows:
85216
Table truncated, full table size
3582 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM92942.CEL.gz
5.7 Mb
(ftp)
(http)
CEL
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