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Sample GSM94 Query DataSets for GSM94
Status Public on Jul 19, 2001
Title Renal cell carcinoma: rccc-4, tumor 1 (part 1 of 2)
Sample type RNA
 
Source name renal clear cell carcinoma (primary tumor)
Organism Homo sapiens
Extracted molecule total RNA
 
Description clinical.stage=I
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=NA
died=NA
tumorsize.cm=4.5
sex=m
age=72
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3625217 reuse=4 date=13-Jan-2000
 
Submission date Jul 19, 2001
Last update date May 27, 2005
Contact name Wolfgang Huber
E-mail(s) w.huber@dkfz.de
Phone +49-6221-424709
Fax +49-6221-423470
URL http://www.dkfz-heidelberg.de/abt0840
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL9
Series (1)
GSE3 Renal Cell Carcinoma Differential Expression

Data table header descriptions
ID_REF
SIGNAL_RAW Mean spot intensity
BKD_RAW 33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE SIGNAL_RAW-SIGNAL_BKD

Data table
ID_REF SIGNAL_RAW BKD_RAW VALUE
1 52284 57121 -4837
2 36937 57121 -20184
3 77785 57121 20664
4 20823 57121 -36298
5 116422 57121 59301
6 953597 57121 896476
7 1294929 57121 1237808
8 139046 57121 81925
9 133521 57121 76400
10 37884 57121 -19237
11 143646 57121 86525
12 40966 57121 -16155
13 1426789 57121 1369668
14 53565 57121 -3556
15 16865 57121 -40256
16 13737 57121 -43384
17 6807 19600 -12793
18 12013 19600 -7587
19 9704 19600 -9896
20 12581 19600 -7019

Total number of rows: 36864

Table truncated, full table size 853 Kbytes.




Supplementary data files not provided

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