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Sample GSM943208 Query DataSets for GSM943208
Status Public on Jul 09, 2012
Title Human Whole blood RNA 8
Sample type RNA
 
Source name CONTROL_Whole blood
Organism Homo sapiens
Characteristics age: 29
gender: female
status: CONTROL
tissue: Whole blood
Extracted molecule total RNA
Extraction protocol Standard Qiagen PAXgene extraction (manual and Qiacube)
Label biotin
Label protocol Standard Illumina TotalPrep kit amplification and labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description 4235991003_H
Data processing Data were backgroundcorrected in Beadstudio (v.3.2.3) and transformed (vst) and normalised (rsn) in Lumi (R package)
 
Submission date Jun 05, 2012
Last update date Jul 09, 2012
Contact name Simone de Jong
Organization name UCLA
Street address 695 Charles E. Young Drive south
City Los Angeles
State/province California
ZIP/Postal code 90095
Country USA
 
Platform ID GPL6883
Series (2)
GSE38481 A gene co-expression network in whole blood of schizophrenia patients is independent of antipsychotic-use and enriched for brain-expressed genes [HumanRef-8 v3.0]
GSE38485 A gene co-expression network in whole blood of schizophrenia patients is independent of antipsychotic-use and enriched for brain-expressed genes

Data table header descriptions
ID_REF
VALUE Robust spline normalized
Detection

Data table
ID_REF VALUE Detection
ILMN_1762337 7.170577597 0.28
ILMN_2055271 7.706728366 1
ILMN_2383229 7.205472915 0.4144
ILMN_1806310 7.329511854 0.7552
ILMN_1779670 7.400672407 0.8512
ILMN_2321282 8.165354201 1
ILMN_1772582 7.241929851 0.544
ILMN_1717783 7.191772949 0.368
ILMN_1814316 7.062732776 0.0192
ILMN_2359168 7.126165395 0.1264
ILMN_1731507 7.121374151 0.1152
ILMN_1787689 7.464143947 0.912
ILMN_1745607 7.135055948 0.1424
ILMN_2136495 7.135739508 0.144
ILMN_1668111 7.101481072 0.0736
ILMN_2295559 7.180828744 0.328
ILMN_1735045 7.268940529 0.6256
ILMN_1680754 7.502980482 0.9552
ILMN_2375184 7.250222552 0.5712
ILMN_1659452 7.230896666 0.5088

Total number of rows: 24526

Table truncated, full table size 698 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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