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Sample GSM943340 Query DataSets for GSM943340
Status Public on Jul 09, 2012
Title Human Whole blood RNA 135
Sample type RNA
 
Source name CONTROL_whole blood
Organism Homo sapiens
Characteristics age: 33
gender: female
status: CONTROL
tissue: whole blood
Extracted molecule total RNA
Extraction protocol Standard Qiagen PAXgene extraction (manual and Qiacube)
Label biotin
Label protocol Standard Illumina TotalPrep kit amplification and labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description 4455416087_A
Data processing Data were backgroundcorrected in Beadstudio (v. 3.2.3) and transformed (vst) and normalised (rsn) in Lumi (R package)
 
Submission date Jun 05, 2012
Last update date Jul 09, 2012
Contact name Simone de Jong
Organization name UCLA
Street address 695 Charles E. Young Drive south
City Los Angeles
State/province California
ZIP/Postal code 90095
Country USA
 
Platform ID GPL6947
Series (2)
GSE38484 A gene co-expression network in whole blood of schizophrenia patients is independent of antipsychotic-use and enriched for brain-expressed genes [HumanHT-12 V3.0]
GSE38485 A gene co-expression network in whole blood of schizophrenia patients is independent of antipsychotic-use and enriched for brain-expressed genes

Data table header descriptions
ID_REF
VALUE Robust spline normalized
Detection

Data table
ID_REF VALUE Detection
ILMN_1802380 10.41082559 1
ILMN_1893287 7.416003042 0.51243
ILMN_1736104 7.410178326 0.47376
ILMN_1792389 9.117464056 1
ILMN_1854015 7.522073669 0.91298
ILMN_1904757 7.461859654 0.77762
ILMN_1740305 7.484495301 0.84116
ILMN_1665168 7.380849516 0.14227
ILMN_2375156 7.447797677 0.72238
ILMN_1705423 7.636533143 1
ILMN_1716072 7.391028268 0.25552
ILMN_1697642 7.526524835 0.92265
ILMN_1788184 7.652689545 1
ILMN_1681845 7.814493115 1
ILMN_1823296 7.476740006 0.82459
ILMN_1889845 7.380849516 0.14227
ILMN_1746923 7.425061185 0.58564
ILMN_1690979 7.685311995 1
ILMN_1811114 7.410178326 0.47376
ILMN_1660729 7.388436068 0.22928

Total number of rows: 48743

Table truncated, full table size 1477 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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