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Sample GSM943358 Query DataSets for GSM943358
Status Public on Jul 09, 2012
Title Human Whole blood RNA 153
Sample type RNA
 
Source name schizophrenia (SCZ)_whole blood
Organism Homo sapiens
Characteristics age: 37
gender: male
status: schizophrenia (SCZ)
tissue: whole blood
Extracted molecule total RNA
Extraction protocol Standard Qiagen PAXgene extraction (manual and Qiacube)
Label biotin
Label protocol Standard Illumina TotalPrep kit amplification and labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description 4455416115_H
Data processing Data were backgroundcorrected in Beadstudio (v. 3.2.3) and transformed (vst) and normalised (rsn) in Lumi (R package)
 
Submission date Jun 05, 2012
Last update date Jul 09, 2012
Contact name Simone de Jong
Organization name UCLA
Street address 695 Charles E. Young Drive south
City Los Angeles
State/province California
ZIP/Postal code 90095
Country USA
 
Platform ID GPL6947
Series (2)
GSE38484 A gene co-expression network in whole blood of schizophrenia patients is independent of antipsychotic-use and enriched for brain-expressed genes [HumanHT-12 V3.0]
GSE38485 A gene co-expression network in whole blood of schizophrenia patients is independent of antipsychotic-use and enriched for brain-expressed genes

Data table header descriptions
ID_REF
VALUE Robust spline normalized
Detection

Data table
ID_REF VALUE Detection
ILMN_1802380 10.55370787 1
ILMN_1893287 7.388723885 0.22192
ILMN_1736104 7.431372731 0.48493
ILMN_1792389 8.067094079 1
ILMN_1854015 7.494214096 0.80548
ILMN_1904757 7.426081128 0.44795
ILMN_1740305 7.566573327 0.95753
ILMN_1665168 7.489015264 0.79315
ILMN_2375156 7.540799798 0.91507
ILMN_1705423 7.457690346 0.63973
ILMN_1716072 7.377934275 0.17123
ILMN_1697642 7.787069307 1
ILMN_1788184 7.447189711 0.59041
ILMN_1681845 9.223427351 1
ILMN_1823296 7.420779164 0.41644
ILMN_1889845 7.399458549 0.29452
ILMN_1746923 7.441926598 0.55342
ILMN_1690979 7.587164748 0.9863
ILMN_1811114 7.431372731 0.48493
ILMN_1660729 7.394097826 0.26438

Total number of rows: 48743

Table truncated, full table size 1474 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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