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Sample GSM943388 Query DataSets for GSM943388
Status Public on Jul 09, 2012
Title Human Whole blood RNA 183
Sample type RNA
 
Source name CONTROL_whole blood
Organism Homo sapiens
Characteristics age: 37
gender: male
status: CONTROL
tissue: whole blood
Extracted molecule total RNA
Extraction protocol Standard Qiagen PAXgene extraction (manual and Qiacube)
Label biotin
Label protocol Standard Illumina TotalPrep kit amplification and labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description 4455416151_L
Data processing Data were backgroundcorrected in Beadstudio (v. 3.2.3) and transformed (vst) and normalised (rsn) in Lumi (R package)
 
Submission date Jun 05, 2012
Last update date Jul 09, 2012
Contact name Simone de Jong
Organization name UCLA
Street address 695 Charles E. Young Drive south
City Los Angeles
State/province California
ZIP/Postal code 90095
Country USA
 
Platform ID GPL6947
Series (2)
GSE38484 A gene co-expression network in whole blood of schizophrenia patients is independent of antipsychotic-use and enriched for brain-expressed genes [HumanHT-12 V3.0]
GSE38485 A gene co-expression network in whole blood of schizophrenia patients is independent of antipsychotic-use and enriched for brain-expressed genes

Data table header descriptions
ID_REF
VALUE Robust spline normalized
Detection

Data table
ID_REF VALUE Detection
ILMN_1802380 10.37254485 1
ILMN_1893287 7.379616823 0.33198
ILMN_1736104 7.395950002 0.38347
ILMN_1792389 7.840574913 1
ILMN_1854015 7.773239824 1
ILMN_1904757 7.460501088 0.64634
ILMN_1740305 7.263423909 0.02846
ILMN_1665168 7.674463335 0.99322
ILMN_2375156 7.73158259 1
ILMN_1705423 7.476429523 0.69648
ILMN_1716072 7.476429523 0.69648
ILMN_1697642 7.786911054 1
ILMN_1788184 7.313589302 0.10027
ILMN_1681845 8.626797633 1
ILMN_1823296 7.313589302 0.10027
ILMN_1889845 7.444486174 0.57588
ILMN_1746923 7.444486174 0.57588
ILMN_1690979 7.717475721 1
ILMN_1811114 7.412207846 0.45664
ILMN_1660729 7.296923746 0.06911

Total number of rows: 48743

Table truncated, full table size 1488 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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