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Sample GSM948646 Query DataSets for GSM948646
Status Public on Jun 14, 2012
Title Control rep2
Sample type RNA
 
Source name ESC untreated control
Organism Mus musculus
Characteristics strain: C57Bl/6
cell line: ESCs stably stably expressing a chimeric receptor (GRgp-Y118F)
agent: control
Treatment protocol GCSF (homemade), LIF (homemade), PD0325901 (Stemgent 1 µM)
Growth protocol GMEM medium (Sigma) supplemented with 10% fetal bovine serum (FBS) (Hyclone), 2 mM L-glutamine (Gibco), 1 mM sodium pyruvate (Gibco), 1% nonessential amino acids (Gibco), 0.1 mM β-mercaptoethanol (Sigma)
Extracted molecule total RNA
Extraction protocol Total RNA was extracted by using TRIzol (Invitrogen)
Label biotin
Label protocol Performed by UCLA DNA Microarray core facility
 
Hybridization protocol Performed by UCLA DNA Microarray core facility
Scan protocol Performed by UCLA DNA Microarray core facility
Description Mouse embryonic stem cell, B6
Data processing The data analysis was performed by using Microarray Я US program provided by USC Norris Medical Library
 
Submission date Jun 14, 2012
Last update date Jun 14, 2012
Contact name Qilong Ying
Organization name USC
Lab Qilong Ying
Street address 1425 san pablo st BCC509b
City los angeles
State/province CA
ZIP/Postal code 90033
Country USA
 
Platform ID GPL6246
Series (1)
GSE38719 Identify the downstream targets of Stat3 by using an engineered mouse ES cell line treated with GCSF and LIF plus PD0325901

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
10338001 12.09302816
10338003 10.40335161
10338004 9.081771354
10338017 12.91652923
10338025 9.080776652
10338026 13.29370931
10338029 9.821221238
10338035 9.097181751
10338036 9.467767964
10338037 4.699657164
10338041 11.0869096
10338042 10.28836059
10338044 12.05444612
10338047 8.199139993
10338056 4.250587682
10338059 13.37573607
10338060 4.588886379
10338063 4.476812321
10338064 7.15983429
10338065 8.274845232

Total number of rows: 34760

Table truncated, full table size 709 Kbytes.




Supplementary file Size Download File type/resource
GSM948646_152617-152607.CEL.gz 4.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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