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Sample GSM948650 Query DataSets for GSM948650
Status Public on Jun 14, 2012
Title LIF/PD rep2
Sample type RNA
 
Source name ESC treated LIF/PD for 1hr
Organism Mus musculus
Characteristics strain: C57Bl/6
cell line: ESCs stably stably expressing a chimeric receptor (GRgp-Y118F)
agent: LIF/PD
Treatment protocol GCSF (homemade), LIF (homemade), PD0325901 (Stemgent 1 µM)
Growth protocol GMEM medium (Sigma) supplemented with 10% fetal bovine serum (FBS) (Hyclone), 2 mM L-glutamine (Gibco), 1 mM sodium pyruvate (Gibco), 1% nonessential amino acids (Gibco), 0.1 mM β-mercaptoethanol (Sigma)
Extracted molecule total RNA
Extraction protocol Total RNA was extracted by using TRIzol (Invitrogen)
Label biotin
Label protocol Performed by UCLA DNA Microarray core facility
 
Hybridization protocol Performed by UCLA DNA Microarray core facility
Scan protocol Performed by UCLA DNA Microarray core facility
Description Mouse embryonic stem cell, B6
Data processing The data analysis was performed by using Microarray Я US program provided by USC Norris Medical Library
 
Submission date Jun 14, 2012
Last update date Jun 14, 2012
Contact name Qilong Ying
Organization name USC
Lab Qilong Ying
Street address 1425 san pablo st BCC509b
City los angeles
State/province CA
ZIP/Postal code 90033
Country USA
 
Platform ID GPL6246
Series (1)
GSE38719 Identify the downstream targets of Stat3 by using an engineered mouse ES cell line treated with GCSF and LIF plus PD0325901

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
10338001 12.1014685
10338003 10.40465973
10338004 9.03242095
10338017 12.97620886
10338025 9.105760531
10338026 13.32053872
10338029 9.832483262
10338035 9.079838051
10338036 9.478896052
10338037 4.665265533
10338041 11.14612325
10338042 10.34219633
10338044 12.0783322
10338047 8.087077624
10338056 4.238022761
10338059 13.37564083
10338060 4.573541929
10338063 4.427757351
10338064 7.046566298
10338065 8.128221523

Total number of rows: 34760

Table truncated, full table size 709 Kbytes.




Supplementary file Size Download File type/resource
GSM948650_152621-152611.CEL.gz 4.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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