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Sample GSM949052 Query DataSets for GSM949052
Status Public on Sep 11, 2020
Title Uraemi_175F
Sample type RNA
 
Source name Artery_case
Organism Homo sapiens
Characteristics diagnosis: uremia
tissue: Ilica artery
Extracted molecule total RNA
Extraction protocol Total RNA was extracted from arteries in basal state using the TRIzol protocol including an extra phenol-chloroform step
Label Biotin
Label protocol total RNA was converted to amplified RNA (aRNA) and fragmented using the MessageAmpTM III RNA amplification kit
 
Hybridization protocol Fragmented aRNA was hybridized to Affymetrix HG-U133A 2.0 chips
Scan protocol see standard Affymetrix protocols
Data processing Data were analyzed in R and analyzed using rma
 
Submission date Jun 15, 2012
Last update date Sep 11, 2020
Contact name Vibe Skov
E-mail(s) vihs@regionsjaelland.dk
Phone +4526178735
Organization name Roskilde Hospital
Department Hematology
Street address Koegevej 7-13
City Roskilde
ZIP/Postal code 4000
Country Denmark
 
Platform ID GPL571
Series (2)
GSE38750 Identification of differential gene expression in blood vessels from patients with uremia (data set 1)
GSE38752 Identification of differential gene expression in blood vessels from patients with uremia

Data table header descriptions
ID_REF
VALUE Normalized values in the matrix template

Data table
ID_REF VALUE
1007_s_at 8.311698596
1053_at 6.466625885
117_at 6.789754388
121_at 8.484892352
1255_g_at 3.763444418
1294_at 7.614490233
1316_at 7.03831583
1320_at 4.120070375
1405_i_at 4.289157711
1431_at 4.236710533
1438_at 5.976693473
1487_at 7.543173058
1494_f_at 6.365380329
1598_g_at 11.22038027
160020_at 7.702707851
1729_at 7.375269713
177_at 4.83808122
1773_at 4.755743694
179_at 8.603919334
1861_at 6.380405626

Total number of rows: 22277

Table truncated, full table size 496 Kbytes.




Supplementary file Size Download File type/resource
GSM949052_Uraemi_175F.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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