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Sample GSM949058 Query DataSets for GSM949058
Status Public on Sep 11, 2020
Title Uraemi_71F
Sample type RNA
 
Source name Artery_case
Organism Homo sapiens
Characteristics diagnosis: uremia
tissue: Ilica artery
Extracted molecule total RNA
Extraction protocol Total RNA was extracted from arteries in basal state using the TRIzol protocol including an extra phenol-chloroform step
Label Biotin
Label protocol total RNA was converted to amplified RNA (aRNA) and fragmented using the MessageAmpTM III RNA amplification kit
 
Hybridization protocol Fragmented aRNA was hybridized to Affymetrix HG-U133A 2.0 chips
Scan protocol see standard Affymetrix protocols
Data processing Data were analyzed in R and analyzed using rma
 
Submission date Jun 15, 2012
Last update date Sep 11, 2020
Contact name Vibe Skov
E-mail(s) vihs@regionsjaelland.dk
Phone +4526178735
Organization name Roskilde Hospital
Department Hematology
Street address Koegevej 7-13
City Roskilde
ZIP/Postal code 4000
Country Denmark
 
Platform ID GPL571
Series (2)
GSE38750 Identification of differential gene expression in blood vessels from patients with uremia (data set 1)
GSE38752 Identification of differential gene expression in blood vessels from patients with uremia

Data table header descriptions
ID_REF
VALUE Normalized values in the matrix template

Data table
ID_REF VALUE
1007_s_at 8.757893405
1053_at 6.500233176
117_at 6.183913862
121_at 8.345442715
1255_g_at 3.766422533
1294_at 8.300319178
1316_at 7.211333217
1320_at 4.235273815
1405_i_at 4.840461803
1431_at 4.594842069
1438_at 6.03450437
1487_at 7.6778919
1494_f_at 6.662774837
1598_g_at 11.6619218
160020_at 7.763952353
1729_at 7.910907564
177_at 5.105456768
1773_at 5.063469544
179_at 8.703126234
1861_at 6.289384004

Total number of rows: 22277

Table truncated, full table size 496 Kbytes.




Supplementary file Size Download File type/resource
GSM949058_Uraemi_71F.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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