|
Status |
Public on Mar 01, 2013 |
Title |
FS001-305063 vs. FS001-ref |
Sample type |
RNA |
|
|
Channel 1 |
Source name |
FS001-IH
|
Organism |
Canis lupus familiaris |
Characteristics |
strain or line: Individual-305063 tissue: Liver genetic_modification: intrahepatic portosystemic shunts patient_id: 305063 disease: IH recovery (recovered = 1, non-recovered = 0): 0
|
Extracted molecule |
total RNA |
Extraction protocol |
RNA isolation using Trizol v1.0 (tissue sections)
|
Label |
Cy5
|
Label protocol |
robot amplification and labeling v1.0
|
|
|
Channel 2 |
Source name |
FS001-refpool
|
Organism |
Canis lupus familiaris |
Characteristics |
strain or line: Pool of 2 healthy individuals tissue: Liver genetic_modification: FS001-refpool
|
Extracted molecule |
total RNA |
Extraction protocol |
RNA isolation using Trizol v1.0 (tissue sections)
|
Label |
Cy3
|
Label protocol |
robot amplification and labeling v1.0
|
|
|
|
Hybridization protocol |
Tecan HS4800 hybridization
|
Scan protocol |
scanning of slides using Agilent G256BA Imagene feature extraction
|
Data processing |
genes, no bg corr, hybset spec. dye corr
|
|
|
Submission date |
Jun 28, 2012 |
Last update date |
Sep 13, 2017 |
Contact name |
Marian Groot Koerkamp |
Organization name |
Princess Maxima Center for Pediatric Oncology
|
Department |
Research
|
Lab |
Drostlab
|
Street address |
Heidelberglaan 25
|
City |
Utrecht |
State/province |
Utrecht |
ZIP/Postal code |
3584 CS |
Country |
Netherlands |
|
|
Platform ID |
GPL15184 |
Series (1) |
GSE39005 |
FS001: Aberrant gene expression in dogs with portosystemic shunts |
|