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Sample GSM96 Query DataSets for GSM96
Status Public on Jul 19, 2001
Title Renal cell carcinoma: rccc-4, tumor 2 (part 1 of 2)
Sample type RNA
 
Source name renal clear cell carcinoma (primary tumor)
Organism Homo sapiens
Extracted molecule total RNA
 
Description clinical.stage=I
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=NA
died=NA
tumorsize.cm=4.5
sex=m
age=72
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3625212 reuse=5 date=15-Mar-2000
 
Submission date Jul 19, 2001
Last update date May 27, 2005
Contact name Wolfgang Huber
E-mail(s) w.huber@dkfz.de
Phone +49-6221-424709
Fax +49-6221-423470
URL http://www.dkfz-heidelberg.de/abt0840
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL9
Series (1)
GSE3 Renal Cell Carcinoma Differential Expression

Data table header descriptions
ID_REF
SIGNAL_RAW Mean spot intensity
BKD_RAW 33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE SIGNAL_RAW-SIGNAL_BKD

Data table
ID_REF SIGNAL_RAW BKD_RAW VALUE
1 5573 9801 -4228
2 6062 9801 -3739
3 4079 9801 -5722
4 4320 9801 -5481
5 12637 9801 2836
6 83291 9801 73490
7 195754 9801 185953
8 18702 9801 8901
9 10460 9801 659
10 9584 9801 -217
11 12887 9801 3086
12 8481 9801 -1320
13 134607 9801 124806
14 8899 9801 -902
15 6107 9801 -3694
16 12544 9801 2743
17 7172 9604 -2432
18 12928 9604 3324
19 11211 9604 1607
20 10648 9604 1044

Total number of rows: 36864

Table truncated, full table size 852 Kbytes.




Supplementary data files not provided

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