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Sample GSM98 Query DataSets for GSM98
Status Public on Jul 19, 2001
Title Renal cell carcinoma: rccc-5, tumor 1 (part 1 of 2)
Sample type RNA
 
Source name renal clear cell carcinoma (primary tumor)
Organism Homo sapiens
Extracted molecule total RNA
 
Description clinical.stage=I
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=42
died=FALSE
tumorsize.cm=3
sex=f
age=58
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180165 reuse=5 date=21-May-1999
 
Submission date Jul 19, 2001
Last update date May 27, 2005
Contact name Wolfgang Huber
E-mail(s) w.huber@dkfz.de
Phone +49-6221-424709
Fax +49-6221-423470
URL http://www.dkfz-heidelberg.de/abt0840
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL9
Series (1)
GSE3 Renal Cell Carcinoma Differential Expression

Data table header descriptions
ID_REF
SIGNAL_RAW Mean spot intensity
BKD_RAW 33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE SIGNAL_RAW-SIGNAL_BKD

Data table
ID_REF SIGNAL_RAW BKD_RAW VALUE
1 7859 11881 -4022
2 5852 11881 -6029
3 4740 11881 -7141
4 13883 11881 2002
5 24365 11881 12484
6 259030 11881 247149
7 11522 11881 -359
8 46989 11881 35108
9 31288 11881 19407
10 8608 11881 -3273
11 24181 11881 12300
12 14312 11881 2431
13 14401 11881 2520
14 10686 11881 -1195
15 11659 11881 -222
16 4924 11881 -6957
17 9011 12100 -3089
18 13306 12100 1206
19 5426 12100 -6674
20 8672 12100 -3428

Total number of rows: 36864

Table truncated, full table size 847 Kbytes.




Supplementary data files not provided

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