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Status
Public on Aug 06, 2004
Title
nl122
Sample type
RNA
Source name
primary acute lymphoblastic leukemia cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample Type: Human Total RNA Project: Evans Sample User: jmorris Experiment User: jmorris Algorithm: Statistical Corner+ Avg:62, Count:32 Corner- Avg:4106, Count:32 BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:29.385857,SFGene:All Background:Avg:50.38,Stdev:0.68,Max:51.9,Min:48.2 Noise:Avg:1.62,Stdev:0.05,Max:1.8,Min:1.5 RawQ:2.10 Keywords = ALL
Submission date
Sep 06, 2003
Last update date
May 28, 2005
Contact name
William E Evans
E-mail(s)
william.evans@stjude.org
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL96
Series (5)
GSE635
Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE646
PRED sensitive all ALL
GSE648
VCR sensitive all ALL
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.
Data table
ID_REF
VALUE
Detection_p_value
1007_s_at
489.5
0.007543
1053_at
251.4
0.039365
117_at
4465.3
0.000322
121_at
940.5
0.011447
1255_g_at
135.0
0.378184
1294_at
450.2
0.117160
1316_at
304.8
0.060419
1320_at
25.8
0.660442
1405_i_at
619.9
0.004591
1431_at
168.2
0.098017
1438_at
396.4
0.127645
1487_at
522.7
0.039365
1494_f_at
380.3
0.218983
1598_g_at
630.3
0.267463
160020_at
726.4
0.027860
1729_at
188.3
0.267463
1773_at
486.1
0.060419
177_at
45.0
0.732537
179_at
1113.7
0.054470
1861_at
400.8
0.003067
Total number of rows: 22283 Table truncated, full table size 561 Kbytes .Supplementary file
Size
Download
File type/resource
GSM9806.CEL.gz
2.8 Mb
(ftp) (http)
CEL