|
| Status |
Public on Dec 11, 2012 |
| Title |
TMD8_8h_2_1 |
| Sample type |
RNA |
| |
|
| Source name |
TMD8 MI-2
|
| Organism |
Homo sapiens |
| Characteristics |
cell line: TMD8
cell type: lymphoma
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol
|
| Scan protocol |
Standard Illumina scanning protocol
|
| Description |
TMD8 MI-2 8h rep1
|
| Data processing |
The data were log2 transformed and quantile normalized with Partek Genome Suite
|
| |
|
| Submission date |
Aug 09, 2012 |
| Last update date |
Dec 11, 2012 |
| Contact name |
Lorena Fontan |
| E-mail(s) |
lof2005@med.cornell.edu
|
| Organization name |
Weill Cornell Medical College
|
| Department |
Medicine
|
| Lab |
Ari Melnick
|
| Street address |
1300 York Ave
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10065 |
| Country |
USA |
| |
|
| Platform ID |
GPL10904 |
| Series (1) |
| GSE40003 |
Genome-wide analysis of gene expression response to MI-2 and z-VRPR-fmk in ABC-DLBCL cell lines |
|
