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GEO accession:
Sample GSM99640
Query DataSets for GSM99640
Status
Public on Nov 01, 2006
Title
Flow sorted derivative chromosomes from Case 1 t(2;7) Ref 34778
Sample type
genomic
Channel 1
Source name
derivative 2
Organism
Homo sapiens
Characteristics
derivative 2
Extracted molecule
genomic DNA
Label
Cy3
Channel 2
Source name
derivative 7
Organism
Homo sapiens
Characteristics
derivative 7
Extracted molecule
genomic DNA
Label
Cy5
Description
flow sorted derivative chromosomes
Data processing
un-normalised raw intensities with no background subtraction and linear ratios (derivative 2/derivative 7)
Submission date
Mar 08, 2006
Last update date
Nov 01, 2006
Contact name
Nigel Paul Carter
E-mail(s)
npc@sanger.ac.uk
Phone
+44 1223 494860
Fax
+44 1223 494919
Organization name
Wellcome Trust Sanger Institute
Department
Molecular Cytogenetics
Street address
Wellcome Trust Genome Campus
City
Hinxton
State/province
Cambirdge
ZIP/Postal code
CB10 1SA
Country
United Kingdom
Platform ID
GPL3472
Series (1)
GSE4297
Ultra high resolution array painting
Data table header descriptions
ID_REF
CH1_SIG_MEAN
Cy3 signal
CH1_BKD_MEAN
Cy3 background
CH2_SIG_MEAN
Cy5 signal
CH2_BKD_MEAN
Cy5 background
VALUE
log2 of PRE_VALUE
PRE_VALUE
linear ratio (derivative 2/derivative 7)
Data table
ID_REF
CH1_SIG_MEAN
CH1_BKD_MEAN
CH2_SIG_MEAN
CH2_BKD_MEAN
VALUE
PRE_VALUE
CHR1700P000000000_F1
1462.44
0.00
661.67
0.00
1.1440
2.21
CHR1700P000000010_F1
1052.78
0.00
372.44
0.00
1.5008
2.83
CHR1700P000000020_F1
1369.22
0.00
338.44
0.00
2.0179
4.05
CHR1700P000000030_F1
1938.00
0.00
465.67
0.00
2.0566
4.16
CHR1700P000000040_F1
1611.67
0.00
479.89
0.00
1.7485
3.36
CHR1700P000000050_F1
2115.00
0.00
441.44
0.00
2.2600
4.79
CHR1700P000000060_F1
1191.78
0.00
450.56
0.00
1.4060
2.65
CHR1700P000000277_F1
887.56
0.00
456.00
0.00
0.9635
1.95
CHR1700P000000287_F1
1387.67
0.00
655.33
0.00
1.0841
2.12
CHR1700P000000488_F1
2622.33
0.00
948.44
0.00
1.4647
2.76
CHR1700P000000498_F1
2243.56
0.00
941.22
0.00
1.2510
2.38
CHR1700P000000508_F1
3953.56
0.00
1602.22
0.00
1.3045
2.47
CHR1700P000000518_F1
4605.11
0.00
1864.89
0.00
1.3045
2.47
CHR1700P000000528_F1
4670.33
0.00
1671.33
0.00
1.4803
2.79
CHR1700P000000538_F1
7884.78
0.00
2589.11
0.00
1.6088
3.05
CHR1700P000000548_F1
6005.67
0.00
2087.44
0.00
1.5261
2.88
CHR1700P000000980_F1
9355.67
0.00
1944.22
0.00
2.2660
4.81
CHR1700P000000990_F1
8190.78
0.00
2000.00
0.00
2.0356
4.10
CHR1700P000001000_F1
7585.89
0.00
1586.67
0.00
2.2570
4.78
CHR1700P000001010_F1
8288.33
0.00
1850.67
0.00
2.1635
4.48
Total number of rows:
388102
Table truncated, full table size
22551 Kbytes
.
Supplementary data files not provided
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