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Sample GSM997738 Query DataSets for GSM997738
Status Public on Dec 30, 2012
Title CL1-5 24h 8/26
Sample type RNA
 
Source name IR 24h
Organism Homo sapiens
Characteristics cell line: CL1-0
tissue: lung adenocarcinoma
treatment: 10 Gy radiation
harvest time after exposure: 24h
Treatment protocol irradiation
Growth protocol Culture with RPMI medium
Extracted molecule total RNA
Extraction protocol Total RNA from the cells were isolated using TRIzol® reagent (Invitrogen, Calsbad, CA) and purified with RNeasy® mini kits (Qiagen)
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description 5332143003_H
Data processing Quantile normalization were carried out using Partek microarray analysis software.
 
Submission date Sep 04, 2012
Last update date Dec 30, 2012
Contact name Mong-Hsun Tsai
E-mail(s) motiont@gmail.com
Phone +886-2-3366-6009
Organization name National Taiwan University
Department Institute of Biotechnology
Street address 4F, No. 81, Chang-Xing St.
City Taipei
ZIP/Postal code 106
Country Taiwan
 
Platform ID GPL8179
Series (1)
GSE40602 MicroRNA-449a Enhances Radiosensitivity in Lung Adenocarcinoma Cells

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_3167304 102 0.73198
ILMN_3168038 2681.54 0
ILMN_3167890 23485.9 0
ILMN_3167526 57.25 0.72577
ILMN_3167209 505.792 0
ILMN_3168219 470.917 0
ILMN_3167464 515.042 0
ILMN_3167213 73.125 0.68707
ILMN_3167057 771 0
ILMN_3168313 95.7917 0.23229
ILMN_3166972 201.5 0.01481
ILMN_3168149 812.125 0
ILMN_3168527 173.292 0.04396
ILMN_3167562 301.958 0.00183
ILMN_3168099 1082.25 0
ILMN_3168017 747.917 0
ILMN_3167545 60.5417 0.68039
ILMN_3167951 641.167 0
ILMN_3167172 275.917 0.06925
ILMN_3167994 249.208 0.00076

Total number of rows: 1145

Table truncated, full table size 28 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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