U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    OSMR oncostatin M receptor [ Homo sapiens (human) ]

    Gene ID: 9180, updated on 28-Oct-2024

    Summary

    Official Symbol
    OSMRprovided by HGNC
    Official Full Name
    oncostatin M receptorprovided by HGNC
    Primary source
    HGNC:HGNC:8507
    See related
    Ensembl:ENSG00000145623 MIM:601743; AllianceGenome:HGNC:8507
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    OSMRB; PLCA1; IL-31RB; OSMRbeta; IL-31R-beta
    Summary
    This gene encodes a member of the type I cytokine receptor family. The encoded protein heterodimerizes with interleukin 6 signal transducer to form the type II oncostatin M receptor and with interleukin 31 receptor A to form the interleukin 31 receptor, and thus transduces oncostatin M and interleukin 31 induced signaling events. Mutations in this gene have been associated with familial primary localized cutaneous amyloidosis. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Dec 2009]
    Expression
    Ubiquitous expression in gall bladder (RPKM 13.2), placenta (RPKM 11.5) and 24 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See OSMR in Genome Data Viewer
    Location:
    5p13.1
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (38846012..38945579)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (39095483..39194986)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (38846114..38935743)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene OSMR divergent transcript Neighboring gene transmembrane protein 126A pseudogene Neighboring gene Sharpr-MPRA regulatory region 7781 Neighboring gene uncharacterized LOC107986414 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:38810677-38811177 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr5:38830048-38831247 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:38878837-38879338 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:38879339-38879838 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:38907734-38908234 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:38908235-38908735 Neighboring gene NANOG hESC enhancer GRCh37_chr5:38916726-38917255 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_84767 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_84768 Neighboring gene RPTOR independent companion of MTOR complex 2 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:39011967-39012173 Neighboring gene androgen induced 1 pseudogene 1 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:39073334-39073860 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:39074387-39074913 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22495 Neighboring gene Sharpr-MPRA regulatory region 14991 Neighboring gene FYN binding protein 1 Neighboring gene golgin A5 pseudogene 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Phenotypes

    Associated conditions

    Description Tests
    Amyloidosis, primary localized cutaneous, 1
    MedGen: C4551501 OMIM: 105250 GeneReviews: Not available
    Compare labs

    EBI GWAS Catalog

    Description
    Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
    EBI GWAS Catalog

    HIV-1 interactions

    Protein interactions

    Protein Gene Interaction Pubs
    Tat tat Microarray analysis indicates HIV-1 Tat-induced upregulation of oncostatin M receptor (OSMR) in primary human brain microvascular endothelial cells PubMed

    Go to the HIV-1, Human Interaction Database

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC75127, MGC150626, MGC150627

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables ciliary neurotrophic factor receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables cytokine binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables cytokine receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables growth factor binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    contributes_to oncostatin-M receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    contributes_to oncostatin-M receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in apical plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in external side of plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of oncostatin-M receptor complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane TAS
    Traceable Author Statement
    more info
     
    part_of receptor complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    oncostatin-M-specific receptor subunit beta
    Names
    IL-31 receptor subunit beta
    IL-31R subunit beta
    interleukin-31 receptor subunit beta
    oncostatin-M specific receptor beta subunit

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_016236.2 RefSeqGene

      Range
      5002..94631
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001168355.3NP_001161827.1  oncostatin-M-specific receptor subunit beta isoform 2 precursor

      See identical proteins and their annotated locations for NP_001161827.1

      Status: REVIEWED

      Source sequence(s)
      BC010943, BM893608
      Consensus CDS
      CCDS54847.1
      UniProtKB/Swiss-Prot
      Q99650
      Related
      ENSP00000422023.1, ENST00000502536.5
      Conserved Domains (1) summary
      cl21522
      Location:233288
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    2. NM_001323504.2NP_001310433.1  oncostatin-M-specific receptor subunit beta isoform 2 precursor

      Status: REVIEWED

      Source sequence(s)
      BC010943, BM893608, DR006275
      Consensus CDS
      CCDS54847.1
      UniProtKB/Swiss-Prot
      Q99650
      Conserved Domains (1) summary
      cl21522
      Location:233288
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    3. NM_001323505.2NP_001310434.1  oncostatin-M-specific receptor subunit beta isoform 1 precursor

      Status: REVIEWED

      Source sequence(s)
      AC026713, AI417125, BU619548, CA439576, CB265977, U60805
      Consensus CDS
      CCDS3928.1
      UniProtKB/Swiss-Prot
      Q6P4E8, Q96QJ6, Q99650
      Conserved Domains (3) summary
      cd00063
      Location:625733
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:539607
      fn3; Fibronectin type III domain
      cl21522
      Location:233288
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    4. NM_001323506.2NP_001310435.1  oncostatin-M-specific receptor subunit beta isoform 3 precursor

      Status: REVIEWED

      Source sequence(s)
      AC026713, AI417125, BU619548, CA439576, CB265977, U60805
      UniProtKB/Swiss-Prot
      Q99650
      Conserved Domains (4) summary
      smart00060
      Location:335407
      FN3; Fibronectin type 3 domain
      cd00063
      Location:626734
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:540608
      fn3; Fibronectin type III domain
      cl21522
      Location:233288
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    5. NM_001323507.2NP_001310436.1  oncostatin-M-specific receptor subunit beta isoform 4 precursor

      Status: REVIEWED

      Source sequence(s)
      AI417125, BQ772952, U60805
      UniProtKB/Swiss-Prot
      Q99650
      Conserved Domains (2) summary
      cd00063
      Location:335419
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam17971
      Location:30138
      LIFR_D2; Leukemia inhibitory factor receptor D2 domain
    6. NM_003999.3NP_003990.1  oncostatin-M-specific receptor subunit beta isoform 1 precursor

      See identical proteins and their annotated locations for NP_003990.1

      Status: REVIEWED

      Source sequence(s)
      BP352496, BU619548, CA439576, CB265977, DR006275, U60805
      Consensus CDS
      CCDS3928.1
      UniProtKB/Swiss-Prot
      Q6P4E8, Q96QJ6, Q99650
      Related
      ENSP00000274276.3, ENST00000274276.8
      Conserved Domains (3) summary
      cd00063
      Location:625733
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:539607
      fn3; Fibronectin type III domain
      cl21522
      Location:233288
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

      Range
      38846012..38945579
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011514161.3XP_011512463.1  oncostatin-M-specific receptor subunit beta isoform X3

      Conserved Domains (4) summary
      smart00060
      Location:335407
      FN3; Fibronectin type 3 domain
      cd00063
      Location:626734
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:540608
      fn3; Fibronectin type III domain
      cl21522
      Location:233288
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    2. XM_017010019.2XP_016865508.1  oncostatin-M-specific receptor subunit beta isoform X4

    3. XM_047417872.1XP_047273828.1  oncostatin-M-specific receptor subunit beta isoform X4

    4. XM_005248384.1XP_005248441.1  oncostatin-M-specific receptor subunit beta isoform X1

      See identical proteins and their annotated locations for XP_005248441.1

      Conserved Domains (4) summary
      smart00060
      Location:335407
      FN3; Fibronectin type 3 domain
      cd00063
      Location:626734
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:540608
      fn3; Fibronectin type III domain
      cl21522
      Location:233288
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    5. XM_005248386.3XP_005248443.1  oncostatin-M-specific receptor subunit beta isoform X5

      Conserved Domains (3) summary
      smart00060
      Location:335407
      FN3; Fibronectin type 3 domain
      cd00063
      Location:446522
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cl21522
      Location:233288
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    6. XM_005248387.3XP_005248444.1  oncostatin-M-specific receptor subunit beta isoform X6

      Conserved Domains (2) summary
      cd00063
      Location:335419
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam17971
      Location:30138
      LIFR_D2; Leukemia inhibitory factor receptor D2 domain
    7. XM_047417873.1XP_047273829.1  oncostatin-M-specific receptor subunit beta isoform X5

    8. XM_047417870.1XP_047273826.1  oncostatin-M-specific receptor subunit beta isoform X1

    9. XM_047417871.1XP_047273827.1  oncostatin-M-specific receptor subunit beta isoform X2

      UniProtKB/Swiss-Prot
      Q6P4E8, Q96QJ6, Q99650

    RNA

    1. XR_925661.1 RNA Sequence

    2. XR_007058659.1 RNA Sequence

    3. XR_007058660.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060929.1 Alternate T2T-CHM13v2.0

      Range
      39095483..39194986
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054353784.1XP_054209759.1  oncostatin-M-specific receptor subunit beta isoform X3

    2. XM_054353785.1XP_054209760.1  oncostatin-M-specific receptor subunit beta isoform X4

    3. XM_054353786.1XP_054209761.1  oncostatin-M-specific receptor subunit beta isoform X4

    4. XM_054353781.1XP_054209756.1  oncostatin-M-specific receptor subunit beta isoform X1

    5. XM_054353787.1XP_054209762.1  oncostatin-M-specific receptor subunit beta isoform X5

    6. XM_054353789.1XP_054209764.1  oncostatin-M-specific receptor subunit beta isoform X6

    7. XM_054353788.1XP_054209763.1  oncostatin-M-specific receptor subunit beta isoform X5

    8. XM_054353782.1XP_054209757.1  oncostatin-M-specific receptor subunit beta isoform X1

    9. XM_054353783.1XP_054209758.1  oncostatin-M-specific receptor subunit beta isoform X2

      UniProtKB/Swiss-Prot
      Q6P4E8, Q96QJ6, Q99650

    RNA

    1. XR_008487195.1 RNA Sequence

    2. XR_008487196.1 RNA Sequence

    3. XR_008487197.1 RNA Sequence