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    NB-ARC domain-containing disease resistance protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841440, updated on 18-Sep-2024

    Summary

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    Official Full Name
    NB-ARC domain-containing disease resistance protein
    Primary source
    TAIR:AT1G50180
    Locus tag
    AT1G50180
    See related
    Araport:AT1G50180
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14I3.19; F14I3_19
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (18583964..18587136)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ribonuclease H superfamily polynucleotidyl transferase Neighboring gene sirohydrochlorin ferrochelatase B Neighboring gene Cysteine/Histidine-rich C1 domain family protein Neighboring gene Alanyl-tRNA synthetase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of ubiquitinated proteins in Arabidopsis. Manzano C, et al. Plant Mol Biol, 2008 Sep. PMID 18535787
    2. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ADP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    NB-ARC domain-containing disease resistance protein
    NP_175437.1
    • NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      18583964..18587136
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103903.2 → NP_175437.1  NB-ARC domain-containing disease resistance protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175437.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4I4Y9, Q9SX38
      UniProtKB/TrEMBL
      A0A5S9WNL4
      Conserved Domains (3) summary
      cd14798
      Location:2 → 126
      RX-CC_like; Coiled-coil domain of the potato virux X resistance protein and similar proteins
      pfam00931
      Location:167 → 459
      NB-ARC; NB-ARC domain
      cl21455
      Location:197 → 301
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SX38.2

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