accs 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional) [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: accsprovided by ZNC
Official Full Name: 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)provided by ZNC
Primary source: ZFIN:ZDB-GENE-050327-39
See related: Ensembl:ENSDARG00000052124 AllianceGenome:ZFIN:ZDB-GENE-050327-39
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fa10f06; wu:fa10f06; zgc:113217
Summary: Predicted to enable transaminase activity. Predicted to be involved in amino acid metabolic process. Predicted to act upstream of or within biosynthetic process. Orthologous to human ACCS (1-aminocyclopropane-1-carboxylate synthase homolog (inactive)). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 25

Exon count:: 15

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	25	NC_007136.7 (8921482..8949627)
105	previous assembly	GRCz10 (GCF_000002035.5)	25	NC_007136.6 (8844316..8872559)

Chromosome 25 - NC_007136.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables catalytic activity	IEA Inferred from Electronic Annotation more info
enables pyridoxal phosphate binding	IEA Inferred from Electronic Annotation more info
enables transaminase activity	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in amino acid metabolic process	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within biosynthetic process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: 1-aminocyclopropane-1-carboxylate synthase-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001014323.4 → NP_001014345.3 1-aminocyclopropane-1-carboxylate synthase-like protein 1

Status: VALIDATED

Source sequence(s)

AL935203

Related

ENSDARP00000068404.3, ENSDART00000073914.4