gpm6aa glycoprotein M6Aa [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: gpm6aaprovided by ZNC
Official Full Name: glycoprotein M6Aaprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030710-7
See related: Ensembl:ENSDARG00000055455 AllianceGenome:ZFIN:ZDB-GENE-030710-7
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:77575; wu:fj36c01
Summary: Predicted to be involved in neuron projection development. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in several cellular components, including axonal growth cone; filopodium; and neuronal cell body. Is expressed in immature eye; nervous system; and neural tube. Orthologous to human GPM6A (glycoprotein M6A). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 14

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	14	NC_007125.7 (36348949..36378281, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	14	NC_007125.6 (36008635..36037967, complement)

Chromosome 14 - NC_007125.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

fj36c01.x1 (e-PCR)
- UniSTS:199208

fj36c01.x1 (e-PCR)
- UniSTS:204629

fj46h04.x1 (e-PCR)
- UniSTS:204630

fk62c09.x1 (e-PCR)
- UniSTS:201316

Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
involved_in neuron projection development	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in axonal growth cone	IBA Inferred from Biological aspect of Ancestor more info
is_active_in filopodium	IBA Inferred from Biological aspect of Ancestor more info
located_in membrane	IEA Inferred from Electronic Annotation more info
is_active_in neuronal cell body	IBA Inferred from Biological aspect of Ancestor more info
is_active_in plasma membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: glycoprotein M6Aa

Names: DMbeta1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.