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    YBL028C uncharacterized protein [ Saccharomyces cerevisiae S288C ]

    Gene ID: 852253, updated on 17-May-2024

    Summary

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    Gene symbol
    YBL028C
    Gene description
    uncharacterized protein
    Primary source
    FungiDB:YBL028C
    Locus tag
    YBL028C
    See related
    SGD:S000000124; AllianceGenome:SGD:S000000124; VEuPathDB:YBL028C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in nucleolus. Part of preribosome, large subunit precursor. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See YBL028C in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_001134.8 (167518..167838, complement)

    Chromosome II - NC_001134.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ribosomal 60S subunit protein L19B Neighboring gene Sm-like protein LSM2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001134.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Organization and characterization of the two yeast ribosomal protein YL19 genes. Song JM, et al. Curr Genet, 1996 Sep. PMID 8781168
    2. Nucleolar size regulates nuclear envelope shape in Saccharomyces cerevisiae. Male G, et al. J Cell Sci, 2020 Oct 30. PMID 32973112
    3. The budding yeast rRNA and ribosome biosynthesis (RRB) regulon contains over 200 genes. Wade CH, et al. Yeast, 2006 Mar. PMID 16544271
    4. In vivo functional characterization of the Saccharomyces cerevisiae 60S biogenesis GTPase Nog1. Fuentes JL, et al. Mol Genet Genomics, 2007 Jul. PMID 17443350
    5. Mutational Analysis of the Nsa2 N-Terminus Reveals Its Essential Role in Ribosomal 60S Subunit Assembly. Paternoga H, et al. Int J Mol Sci, 2020 Nov 30. PMID 33266193, Free PMC Article

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleolus HDA PubMed 
    located_in nucleus HDA PubMed 
    part_of preribosome, large subunit precursor HDA PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_009525.1
    • hypothetical protein that may interact with ribosomes; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus; predicted to be involved in ribosome biogenesis

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001134.8 Reference assembly

      Range
      167518..167838 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001178268.1 → NP_009525.1  TPA: uncharacterized protein YBL028C [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_009525.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VPX2, P38202
      UniProtKB/TrEMBL
      A0A6A5Q4J4, A6ZKS0, B3LNG5, C7GX83, C8Z3W8, G2W8Y1, N1P7E6
      Conserved Domains (1) summary
      pfam10338
      Location:1 → 44
      DUF2423; Protein of unknown function (DUF2423)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    3JCT_z.1
    6ELZ_z.1
    6EM1_z.1
    6EM5_z.1
    6M62_z.1
    6N8J_z.1
    6N8K_z.1
    6N8L_z.1
    P38202.1

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