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    • Showing Current items.

    si:dkey-286j15.1 si:dkey-286j15.1 [ Danio rerio (zebrafish) ]

    Gene ID: 796378, updated on 17-Sep-2024

    Summary

    Official Symbol
    si:dkey-286j15.1provided by ZNC
    Official Full Name
    si:dkey-286j15.1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060503-447
    See related
    Ensembl:ENSDARG00000040864 AllianceGenome:ZFIN:ZDB-GENE-060503-447
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Orthologs
    NEW
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    Genomic context

    See si:dkey-286j15.1 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (30009926..30033583)
    105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (30060688..30084388)

    Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene si:dkey-286j15.3 Neighboring gene uncharacterized LOC137488970 Neighboring gene stonustoxin subunit beta-like Neighboring gene adducin 3 (gamma) a

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    uncharacterized protein LOC796378

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001126458.1NP_001119930.1  uncharacterized protein LOC796378

      Status: PREDICTED

      Source sequence(s)
      AL845330
      UniProtKB/TrEMBL
      A0A8M1NGT6, Q1MTG4
      Related
      ENSDARP00000119648.1, ENSDART00000142529.2
      Conserved Domains (1) summary
      cl15755
      Location:147
      SAM_superfamily; SAM (Sterile alpha motif )

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007133.7 Reference GRCz11 Primary Assembly

      Range
      30009926..30033583
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018395119.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      101720..139967
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)