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    unc119a2 unc-119 lipid binding chaperone a2 [ Danio rerio (zebrafish) ]

    Gene ID: 678653, updated on 2-Nov-2024

    Summary

    Official Symbol
    unc119a2provided by ZNC
    Official Full Name
    unc-119 lipid binding chaperone a2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050201-2
    See related
    Ensembl:ENSDARG00000044362 AllianceGenome:ZFIN:ZDB-GENE-050201-2
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    Unc119; unc119b; unc119.2; zfUnc119a; zgc:136476
    Summary
    Predicted to enable lipid binding activity. Acts upstream of or within Kupffer's vesicle development and visual perception. Predicted to be located in cytoplasm and cytoskeleton. Predicted to be active in intercellular bridge and microtubule cytoskeleton. Is expressed in several structures, including adaxial cell; central nervous system; renal system; solid lens vesicle; and visual system. Human ortholog(s) of this gene implicated in cone-rod dystrophy 24 and immunodeficiency 13. Orthologous to human UNC119 (unc-119 lipid binding chaperone). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See unc119a2 in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 21 NC_007132.7 (39121453..39177430, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 21 NC_007132.6 (39076395..39132372, complement)

    Chromosome 21 - NC_007132.7Genomic Context describing neighboring genes Neighboring gene vitronectin b Neighboring gene solute carrier family 13 member 2 Neighboring gene crystallin, beta A1b Neighboring gene carboxypeptidase D, b

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Clone Names

    • MGC136476, MGC158496

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables lipid binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within Kupffer's vesicle development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within endocytosis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in lipoprotein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in mitotic cytokinesis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in negative regulation of caveolin-mediated endocytosis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in negative regulation of clathrin-dependent endocytosis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in nervous system development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in visual perception IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within visual perception IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within visual perception IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in centrosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in intercellular bridge IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in spindle midzone IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in spindle pole IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    protein unc-119 homolog B
    Names
    unc-119 homolog 2
    unc-119 homolog b
    unc-119-like protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001040394.2NP_001035484.1  protein unc-119 homolog B isoform 1

      See identical proteins and their annotated locations for NP_001035484.1

      Status: PROVISIONAL

      Source sequence(s)
      BC124479
      UniProtKB/TrEMBL
      B2GPP9, Q1RM42
      Related
      ENSDARP00000065142.5, ENSDART00000065143.6
      Conserved Domains (1) summary
      pfam05351
      Location:106260
      GMP_PDE_delta; GMP-PDE, delta subunit

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007132.7 Reference GRCz11 Primary Assembly

      Range
      39121453..39177430 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)