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    cby1 chibby 1, beta catenin antagonist [ Danio rerio (zebrafish) ]

    Gene ID: 326875, updated on 2-Nov-2024

    Summary

    Official Symbol
    cby1provided by ZNC
    Official Full Name
    chibby 1, beta catenin antagonistprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-5074
    See related
    Ensembl:ENSDARG00000077409 AllianceGenome:ZFIN:ZDB-GENE-030131-5074
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    LRP; fe37g01; wu:fe37g01
    Summary
    Acts upstream of or within cilium organization. Is expressed in several structures, including dermis; mesoderm; nervous system; neural tube; and renal system. Orthologous to human CBY1 (chibby 1, beta catenin antagonist). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See cby1 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (19188588..19190159)
    105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (19066714..19068285)

    Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene TEF transcription factor, PAR bZIP family member a Neighboring gene zinc finger CCCH-type containing 7Bb Neighboring gene solute carrier family 16 member 8 Neighboring gene pdgfa associated protein 1a

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    protein chibby homolog 1
    Names
    chibby homolog 1
    leucine-rich protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001003838.1NP_001003838.1  protein chibby homolog 1

      See identical proteins and their annotated locations for NP_001003838.1

      Status: PROVISIONAL

      Source sequence(s)
      AF393213
      UniProtKB/TrEMBL
      Q8JI29
      Related
      ENSDARP00000121412.1, ENSDART00000148011.3
      Conserved Domains (1) summary
      pfam14645
      Location:1112
      Chibby; Chibby family

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007123.7 Reference GRCz11 Primary Assembly

      Range
      19188588..19190159
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_2

    Genomic

    1. NW_018395301.1 Reference GRCz11 ALT_DRER_TU_2

      Range
      424944..426514
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)