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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_012046.2Â RefSeqGene
- Range
-
207446..389009
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001001331.4 → NP_001001331.1  plasma membrane calcium-transporting ATPase 2 isoform 1
See identical proteins and their annotated locations for NP_001001331.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1), also known as WB.
- Source sequence(s)
-
AB210008, AC022384, AK308898, S95738, X63575
- Consensus CDS
-
CCDS33701.1
- UniProtKB/Swiss-Prot
- O00766, Q01814, Q12994, Q16818
- UniProtKB/TrEMBL
-
Q4LE63
- Related
- ENSP00000353414.2, ENST00000360273.7
- Conserved Domains (2) summary
-
- TIGR01517
Location:12 → 1087
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam12424
Location:1126 → 1172
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
-
NM_001330611.3 → NP_001317540.1  plasma membrane calcium-transporting ATPase 2 isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks three in-frame exons in the 5' coding region, and contains two additional exons in the 3' coding regions, resulting in novel 3' coding region and 3' UTR, compared to variant 1. It encodes isoform 3, which is shorter and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC018839, AC022384, AC090841
- Consensus CDS
-
CCDS82733.1
- UniProtKB/TrEMBL
-
A0A2U3TZI3
- Related
- ENSP00000495228.1, ENST00000644807.2
-
NM_001353564.1 → NP_001340493.1  plasma membrane calcium-transporting ATPase 2 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and lacks three in-frame exons, compared to variant 1. The encoded isoform (2), also known as ZB, is shorter, compared to isoform 1. Variants 2 and 4 encode the same isoform.
- Source sequence(s)
-
AC022384, AC090841, BM681464, L20977
- Consensus CDS
-
CCDS2601.1
- UniProtKB/TrEMBL
-
Q4LE63
- Conserved Domains (2) summary
-
- pfam12424
Location:1081 → 1127
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
- cl27747
Location:12 → 1042
- E1-E2_ATPase; E1-E2 ATPase
-
NM_001363862.1 → NP_001350791.1  plasma membrane calcium-transporting ATPase 2 isoform 4
Status: REVIEWED
- Source sequence(s)
-
AC018839, AC022384, AC090841
- Consensus CDS
-
CCDS87040.1
- UniProtKB/TrEMBL
- A0A2U3TZI3, A0A2U3U055
- Related
- ENSP00000492732.2, ENST00000638646.2
- Conserved Domains (2) summary
-
- pfam12424
Location:1081 → 1121
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
- cl27747
Location:12 → 1042
- E1-E2_ATPase; E1-E2 ATPase
-
NM_001683.5 → NP_001674.2  plasma membrane calcium-transporting ATPase 2 isoform 2
See identical proteins and their annotated locations for NP_001674.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks three in-frame exons, compared to variant 1. The encoded isoform (2), also known as ZB, is shorter, compared to isoform 1. Variants 2 and 4 encode the same isoform.
- Source sequence(s)
-
AB210008, AC022384, AK308898, X63575
- Consensus CDS
-
CCDS2601.1
- UniProtKB/TrEMBL
-
Q4LE63
- Related
- ENSP00000380267.1, ENST00000397077.6
- Conserved Domains (2) summary
-
- pfam12424
Location:1081 → 1127
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
- cl27747
Location:12 → 1042
- E1-E2_ATPase; E1-E2 ATPase
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000003.12Â Reference GRCh38.p14 Primary Assembly
- Range
-
10324023..10708007 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017006487.2 → XP_016861976.1  plasma membrane calcium-transporting ATPase 2 isoform X4
- UniProtKB/TrEMBL
-
Q4LE63
- Related
- ENSP00000494381.1, ENST00000646379.1
- Conserved Domains (2) summary
-
- pfam12424
Location:1081 → 1127
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
- cl27747
Location:12 → 1042
- E1-E2_ATPase; E1-E2 ATPase
-
XM_017006484.3 → XP_016861973.1  plasma membrane calcium-transporting ATPase 2 isoform X2
- UniProtKB/TrEMBL
-
Q4LE63
- Conserved Domains (7) summary
-
- TIGR01517
Location:12 → 1056
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam00122
Location:161 → 457
- E1-E2_ATPase; E1-E2 ATPase
- pfam00689
Location:872 → 1050
- Cation_ATPase_C; Cation transporting ATPase, C-terminus
- pfam00690
Location:51 → 113
- Cation_ATPase_N; Cation transporter/ATPase, N-terminus
- pfam12424
Location:1095 → 1142
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
- pfam12710
Location:659 → 798
- HAD; haloacid dehalogenase-like hydrolase
- pfam13246
Location:518 → 607
- Cation_ATPase; Cation transport ATPase (P-type)
-
XM_006713175.5 → XP_006713238.1  plasma membrane calcium-transporting ATPase 2 isoform X1
See identical proteins and their annotated locations for XP_006713238.1
- UniProtKB/Swiss-Prot
- O00766, Q01814, Q12994, Q16818
- UniProtKB/TrEMBL
-
Q4LE63
- Conserved Domains (2) summary
-
- TIGR01517
Location:12 → 1087
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam12424
Location:1126 → 1172
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
-
XM_017006481.3 → XP_016861970.1  plasma membrane calcium-transporting ATPase 2 isoform X1
- UniProtKB/Swiss-Prot
- O00766, Q01814, Q12994, Q16818
- UniProtKB/TrEMBL
-
Q4LE63
- Conserved Domains (2) summary
-
- TIGR01517
Location:12 → 1087
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam12424
Location:1126 → 1172
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
-
XM_005265179.6 → XP_005265236.1  plasma membrane calcium-transporting ATPase 2 isoform X1
See identical proteins and their annotated locations for XP_005265236.1
- UniProtKB/Swiss-Prot
- O00766, Q01814, Q12994, Q16818
- UniProtKB/TrEMBL
-
Q4LE63
- Conserved Domains (2) summary
-
- TIGR01517
Location:12 → 1087
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam12424
Location:1126 → 1172
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
-
XM_047448198.1 → XP_047304154.1  plasma membrane calcium-transporting ATPase 2 isoform X1
- UniProtKB/Swiss-Prot
- O00766, Q01814, Q12994, Q16818
-
XM_011533752.4 → XP_011532054.1  plasma membrane calcium-transporting ATPase 2 isoform X1
See identical proteins and their annotated locations for XP_011532054.1
- UniProtKB/Swiss-Prot
- O00766, Q01814, Q12994, Q16818
- UniProtKB/TrEMBL
-
Q4LE63
- Conserved Domains (2) summary
-
- TIGR01517
Location:12 → 1087
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam12424
Location:1126 → 1172
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
-
XM_047448199.1 → XP_047304155.1  plasma membrane calcium-transporting ATPase 2 isoform X1
- UniProtKB/Swiss-Prot
- O00766, Q01814, Q12994, Q16818
-
XM_017006483.3 → XP_016861972.1  plasma membrane calcium-transporting ATPase 2 isoform X2
- UniProtKB/TrEMBL
-
Q4LE63
- Related
- ENSP00000414854.2, ENST00000452124.2
- Conserved Domains (7) summary
-
- TIGR01517
Location:12 → 1056
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam00122
Location:161 → 457
- E1-E2_ATPase; E1-E2 ATPase
- pfam00689
Location:872 → 1050
- Cation_ATPase_C; Cation transporting ATPase, C-terminus
- pfam00690
Location:51 → 113
- Cation_ATPase_N; Cation transporter/ATPase, N-terminus
- pfam12424
Location:1095 → 1142
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
- pfam12710
Location:659 → 798
- HAD; haloacid dehalogenase-like hydrolase
- pfam13246
Location:518 → 607
- Cation_ATPase; Cation transport ATPase (P-type)
-
XM_017006488.3 → XP_016861977.1  plasma membrane calcium-transporting ATPase 2 isoform X5
- UniProtKB/TrEMBL
-
A0A2U3TZI3
- Conserved Domains (7) summary
-
- TIGR01517
Location:12 → 1056
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam00122
Location:161 → 457
- E1-E2_ATPase; E1-E2 ATPase
- pfam00689
Location:872 → 1050
- Cation_ATPase_C; Cation transporting ATPase, C-terminus
- pfam00690
Location:51 → 113
- Cation_ATPase_N; Cation transporter/ATPase, N-terminus
- pfam12424
Location:1095 → 1159
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
- pfam12710
Location:659 → 798
- HAD; haloacid dehalogenase-like hydrolase
- pfam13246
Location:518 → 607
- Cation_ATPase; Cation transport ATPase (P-type)
-
XM_017006485.3 → XP_016861974.1  plasma membrane calcium-transporting ATPase 2 isoform X3
- UniProtKB/TrEMBL
-
A0A2U3TZI3
- Related
- ENSP00000324172.6, ENST00000352432.9
- Conserved Domains (7) summary
-
- TIGR01517
Location:12 → 1087
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam00122
Location:161 → 488
- E1-E2_ATPase; E1-E2 ATPase
- pfam00689
Location:903 → 1081
- Cation_ATPase_C; Cation transporting ATPase, C-terminus
- pfam00690
Location:51 → 113
- Cation_ATPase_N; Cation transporter/ATPase, N-terminus
- pfam12424
Location:1126 → 1190
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
- pfam12710
Location:690 → 829
- HAD; haloacid dehalogenase-like hydrolase
- pfam13246
Location:549 → 638
- Cation_ATPase; Cation transport ATPase (P-type)
-
XM_017006482.3 → XP_016861971.1  plasma membrane calcium-transporting ATPase 2 isoform X1
- UniProtKB/Swiss-Prot
- O00766, Q01814, Q12994, Q16818
- UniProtKB/TrEMBL
-
Q4LE63
- Related
- ENSP00000494716.1, ENST00000645850.1
- Conserved Domains (2) summary
-
- TIGR01517
Location:12 → 1087
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam12424
Location:1126 → 1172
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
Alternate T2T-CHM13v2.0
Genomic
-
NC_060927.1Â Alternate T2T-CHM13v2.0
- Range
-
10317333..10702299 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054346653.1 → XP_054202628.1  plasma membrane calcium-transporting ATPase 2 isoform X4
-
XM_054346651.1 → XP_054202626.1  plasma membrane calcium-transporting ATPase 2 isoform X2
-
XM_054346645.1 → XP_054202620.1  plasma membrane calcium-transporting ATPase 2 isoform X1
- UniProtKB/Swiss-Prot
- O00766, Q01814, Q12994, Q16818
-
XM_054346647.1 → XP_054202622.1  plasma membrane calcium-transporting ATPase 2 isoform X1
- UniProtKB/Swiss-Prot
- O00766, Q01814, Q12994, Q16818
-
XM_054346646.1 → XP_054202621.1  plasma membrane calcium-transporting ATPase 2 isoform X1
- UniProtKB/Swiss-Prot
- O00766, Q01814, Q12994, Q16818
-
XM_054346643.1 → XP_054202618.1  plasma membrane calcium-transporting ATPase 2 isoform X1
- UniProtKB/Swiss-Prot
- O00766, Q01814, Q12994, Q16818
-
XM_054346648.1 → XP_054202623.1  plasma membrane calcium-transporting ATPase 2 isoform X1
- UniProtKB/Swiss-Prot
- O00766, Q01814, Q12994, Q16818
-
XM_054346644.1 → XP_054202619.1  plasma membrane calcium-transporting ATPase 2 isoform X1
- UniProtKB/Swiss-Prot
- O00766, Q01814, Q12994, Q16818
-
XM_054346650.1 → XP_054202625.1  plasma membrane calcium-transporting ATPase 2 isoform X2
-
XM_054346654.1 → XP_054202629.1  plasma membrane calcium-transporting ATPase 2 isoform X5
-
XM_054346652.1 → XP_054202627.1  plasma membrane calcium-transporting ATPase 2 isoform X3
-
XM_054346649.1 → XP_054202624.1  plasma membrane calcium-transporting ATPase 2 isoform X1
- UniProtKB/Swiss-Prot
- O00766, Q01814, Q12994, Q16818