GTR Test Accession:
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GTR000253211.1
CAP
Registered in GTR:
2013-06-03
View version history
GTR000253211.1,
registered in GTR:
2013-06-03
Last annual review date for the lab: 2024-03-11
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At a Glance
Test purpose:
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Diagnosis;
Pre-symptomatic
Conditions (1):
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Hemochromatosis type 1
Genes (1):
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HFE (6p22.2)
Methods (1):
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Molecular Genetics - Targeted variant analysis: amplification refractory mutation system (ARMS)
Target population: Help
Testing for hereditary hemochromatosis is indicated in patients with clinical …
Clinical validity:
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Although numerous allelic variants of HFE have been described, only …
Clinical utility:
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Not provided
Ordering Information
Offered by:
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Molecular Diagnostics Laboratory
View lab's test page
View lab's test page
Specimen Source:
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- Buccal swab
- Peripheral (whole) blood
- View specimen requirements
Who can order: Help
- Health Care Provider
Test Order Code:
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HFE Mutation Analysis
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Contact Policy:
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Laboratory can only accept contact from health care providers. Patients/families are encouraged to discuss genetic testing options with their health care provider.
How to Order:
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Test development:
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Test developed by laboratory (no manufacturer test name)
Informed consent required:
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Decline to answer
Pre-test genetic counseling required:
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Decline to answer
Post-test genetic counseling required:
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Decline to answer
Recommended fields not provided:
Lab contact for this test,
Test strategy
Conditions
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Total conditions: 1
Condition/Phenotype | Identifier |
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Test Targets
Genes
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Total genes: 1
Gene | Associated Condition | Germline or Somatic | Allele (Lab-provided) | Variant in NCBI |
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Methodology
Total methods: 1
Method Category
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Test method
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Instrument *
Targeted variant analysis
amplification refractory mutation system (ARMS)
* Instrument: Not provided
Clinical Information
Test purpose:
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Diagnosis;
Pre-symptomatic
Clinical validity:
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Although numerous allelic variants of HFE have been described, only two mutations have been associated with hereditary hemochromatosis; C282Y and H63D. These mutations have a high frequency in the general US population (C282Y/C282Y = 0.4%, C282Y/H63D = 2%, H63D/H63D = 2%, C282Y/wt = up to 9.2%, H63D/wt = 23%), and …
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Target population:
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Testing for hereditary hemochromatosis is indicated in patients with clinical symptoms suggestive of this disease, including; cirrhosis, arthritis, cardiac arrhythmias, hypogonadism, diabetes mellitus and progressive skin pigmentation
Recommended fields not provided:
Clinical utility,
What is the protocol for interpreting a variation as a VUS?,
Are family members with defined clinical status recruited to assess significance of VUS without charge?,
Will the lab re-contact the ordering physician if variant interpretation changes?,
Is research allowed on the sample after clinical testing is complete?,
Sample negative report,
Sample positive report
Technical Information
Test Comments:
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Mutation panel: C282Y, H63D
Availability:
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Tests performed
Entire test performed in-house
Entire test performed in-house
Analytical Validity:
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• This test detects only the HFE C282Y and H63D point mutations and no other mutations that may occur in the HFE gene.
• This test is subjected to interference by various factors such as DNA quality, presence of PCR inhibitor, mutation and polymorphism of HFE gene sequence, etc.
Proficiency testing (PT):
Is proficiency testing performed for this test?
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Yes
Method used for proficiency testing: Help
Formal PT program
PT Provider: Help
American College of Medical Genetics / College of American Pathologists, ACMG/CAP
Yes
Method used for proficiency testing: Help
Formal PT program
PT Provider: Help
American College of Medical Genetics / College of American Pathologists, ACMG/CAP
Recommended fields not provided:
Test Confirmation,
Assay limitations,
Description of internal test validation method,
Citations for Analytical validity,
Description of PT method,
Major CAP category, CAP category, CAP test list
Regulatory Approval
FDA Review:
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Category:
FDA exercises enforcement discretion
Additional Information
Clinical resources:
Practice guidelines:
Consumer resources:
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Patients and consumers
with specific questions about a genetic test should contact a health care provider or a genetics professional.