Clinical Genetic Test
offered by
GTR Test Accession:
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GTR000500397.4
Last updated in GTR:
2016-09-20
View version history
GTR000500397.4,
last updated:
2016-09-20
GTR000500397.3,
last updated:
2015-11-10
GTR000500397.2,
last updated:
2013-11-27
GTR000500397.1,
registered in GTR:
2013-11-27
Last annual review date for the lab: 2024-07-01
LinkOut
At a Glance
Test purpose:
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Diagnosis
Conditions (6):
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Genes (3):
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HBA1 (16p13.3);
HBA2 (16p13.3);
HBB (11p15.4)
Methods (2):
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Molecular Genetics - Deletion/duplication analysis: Multiplex Ligation-dependent Probe Amplification (MLPA); ...
Target population: Help
Not provided
Clinical validity:
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Not provided
Clinical utility:
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Not provided
Ordering Information
Offered by:
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Cincinnati Children's Hospital Medical Center Genetics and Genomics Diagnostic Laboratory
View lab's website
View lab's test page
View lab's website
View lab's test page
Lab contact:
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Contact Policy:
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Laboratory can only accept contact from health care providers. Patients/families are encouraged to discuss genetic testing options with their health care provider.
How to Order:
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Complete the appropriate test requisiton and have it signed by the referring physician.
Order URL
Order URL
Test service:
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Clinical Testing/Confirmation of Mutations Identified Previously
Test additional service:
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Custom Prenatal Testing
Custom mutation-specific/Carrier testing
Custom mutation-specific/Carrier testing
Test development:
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Test developed by laboratory but exempt from FDA oversight (eg. NYS CLEP approved, offered within a hospital or clinic)
Informed consent required:
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Decline to answer
Test strategy:
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The following tests can be ordered as a comprehensive panel or seperately: HBA1/2 deletion/duplication analysis, HBA1/2 full gene sequencing, HBB deletion/duplication analysis, HBB full gene sequencing
Pre-test genetic counseling required:
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Decline to answer
Post-test genetic counseling required:
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Decline to answer
Recommended fields not provided:
Test Order Code,
Specimen source
Conditions
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Total conditions: 6
Condition/Phenotype | Identifier |
---|
Test Targets
Genes
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Total genes: 3
Gene | Associated Condition | Germline or Somatic | Allele (Lab-provided) | Variant in NCBI |
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Methodology
Total methods: 2
Method Category
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Test method
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Instrument *
Deletion/duplication analysis
Multiplex Ligation-dependent Probe Amplification (MLPA)
Sequence analysis of the entire coding region
Bi-directional Sanger Sequence Analysis
* Instrument: Not provided
Clinical Information
Test purpose:
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Diagnosis
Recommended fields not provided:
Clinical validity,
Clinical utility,
Target population,
What is the protocol for interpreting a variation as a VUS?,
Are family members with defined clinical status recruited to assess significance of VUS without charge?,
Will the lab re-contact the ordering physician if variant interpretation changes?,
Is research allowed on the sample after clinical testing is complete?,
Sample negative report,
Sample positive report
Technical Information
Availability:
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Tests performed
Entire test performed in-house
Entire test performed in-house
Analytical Validity:
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The sensitivity of deletion analysis by MLPA is over
90% for large deletions while the sensitivity of DNA
sequencing is over 99% for the detection of nucleotide
base changes, small deletions and insertions in the regions
analyzed.
Assay limitations:
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Large exonic deletions, large insertions and
genetic recombination events may not be identified by
sequencing. Rare primer site variants may lead to erroneous
results with either methodology. Parental studies are
sometimes necessary to determine the phase of identified
sequence variants and their clinical significance.
Proficiency testing (PT):
Is proficiency testing performed for this test?
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Yes
Method used for proficiency testing: Help
Inter-Laboratory
Yes
Method used for proficiency testing: Help
Inter-Laboratory
Recommended fields not provided:
Test Confirmation,
Citations to support assay limitations,
Description of internal test validation method,
Citations for Analytical validity,
PT Provider,
Description of PT method,
Major CAP category, CAP category, CAP test list
Regulatory Approval
FDA Review:
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Category:
FDA exercises enforcement discretion
Additional Information
Reviews:
Clinical resources:
IMPORTANT NOTE:
NIH does not independently verify information submitted to GTR; it relies on submitters to provide information that is accurate and not misleading.
NIH makes no endorsements of tests or laboratories listed in GTR. GTR is not a substitute for medical advice.
Patients and consumers
with specific questions about a genetic test should contact a health care provider or a genetics professional.