GTR Test Accession:
Help
GTR000501215.2
Last updated in GTR:
2015-02-09
View version history
GTR000501215.2,
last updated:
2015-02-09
GTR000501215.1,
registered in GTR:
2014-04-05
Last annual review date for the lab: 2024-03-08
LinkOut
At a Glance
Test purpose:
Help
Diagnosis;
Mutation Confirmation;
Screening
Conditions (1):
Help
Paramyotonia congenita of Von Eulenburg
Genes (1):
Help
SCN4A (17q23.3)
Methods (1):
Help
Molecular Genetics - Sequence analysis of the entire coding region: Oligonucleotide hybridization-based DNA sequencing
Target population: Help
Patients with periodic paralysis
Clinical validity:
Help
Not provided
Clinical utility:
Help
Establish or confirm diagnosis
Ordering Information
Offered by:
Help
Test short name:
Help
PMC
Specimen Source:
Help
- Isolated DNA
- Peripheral (whole) blood
Who can order: Help
- Genetic Counselor
- Health Care Provider
- Licensed Physician
- Physician Assistant
Test Order Code:
Help
PMC
Contact Policy:
Help
Laboratory can only accept contact from health care providers. Patients/families are encouraged to discuss genetic testing options with their health care provider.
How to Order:
Help
Please contact Dr. Moon-Yong Park by e-mail, phone, or fax
Test service:
Help
Clinical Testing/Confirmation of Mutations Identified Previously
Genetic counseling
Genetic counseling
Test additional service:
Help
Custom mutation-specific/Carrier testing
Test development:
Help
Test developed by laboratory (no manufacturer test name)
Informed consent required:
Help
Yes
Test strategy:
Help
Sequence analysis of the entire coding region; Targeted mutation analysis
View citations (1)
- Neurology Asia 2011; 16(2) : 163 \u2013 166
Pre-test genetic counseling required:
Help
Decline to answer
Post-test genetic counseling required:
Help
Decline to answer
Recommended fields not provided:
Lab contact for this test
Conditions
Help
Total conditions: 1
Condition/Phenotype | Identifier |
---|
Test Targets
Genes
Help
Total genes: 1
Gene | Associated Condition | Germline or Somatic | Allele (Lab-provided) | Variant in NCBI |
---|
Methodology
Total methods: 1
Method Category
Help
Test method
Help
Instrument *
Sequence analysis of the entire coding region
Oligonucleotide hybridization-based DNA sequencing
* Instrument: Not provided
Clinical Information
Test purpose:
Help
Diagnosis;
Mutation Confirmation;
Screening
Clinical utility:
Help
Target population:
Help
Patients with periodic paralysis
View citations (1)
- Neurology Asia 2011; 16(2) : 163 – 166
Variant Interpretation:
What is the protocol for interpreting a variation as a VUS?
Help
http://www.uniprot.org/
http://www.uniprot.org/
Will the lab re-contact the ordering physician if variant interpretation changes?
Help
Not provided.
Not provided.
Recommended fields not provided:
Clinical validity,
Are family members with defined clinical status recruited to assess significance of VUS without charge?,
Will the lab re-contact the ordering physician if variant interpretation changes?,
Is research allowed on the sample after clinical testing is complete?,
Sample negative report,
Sample positive report
Technical Information
Test Procedure:
Help
Sequence analysis of the entire coding region; Targeted mutation analysis
View citations (1)
- Neurology Asia 2011; 16(2) : 163 – 166
Test Confirmation:
Help
http://www.uniprot.org/
Availability:
Help
Tests performed
Entire test performed in-house
Entire test performed in-house
Analytical Validity:
Help
100,100,100
View citations (1)
- Neurology Asia 2011; 16(2) : 163 – 166
Proficiency testing (PT):
Is proficiency testing performed for this test?
Help
Yes
Method used for proficiency testing: Help
Inter-Laboratory
Yes
Method used for proficiency testing: Help
Inter-Laboratory
VUS:
Software used to interpret novel variations
Help
PolyPhen-2
Laboratory's policy on reporting novel variations Help
Contacting the person ordering the test
PolyPhen-2
Laboratory's policy on reporting novel variations Help
Contacting the person ordering the test
Recommended fields not provided:
Assay limitations,
Description of internal test validation method,
PT Provider,
Description of PT method,
Major CAP category, CAP category, CAP test list
Regulatory Approval
FDA Review:
Help
Category:
FDA exercises enforcement discretion
Additional Information
Reviews:
Clinical resources:
Molecular resources:
IMPORTANT NOTE:
NIH does not independently verify information submitted to GTR; it relies on submitters to provide information that is accurate and not misleading.
NIH makes no endorsements of tests or laboratories listed in GTR. GTR is not a substitute for medical advice.
Patients and consumers
with specific questions about a genetic test should contact a health care provider or a genetics professional.