GTR Test Accession:
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GTR000521847.6
NYS CLEP
Last updated in GTR:
2022-10-25
View version history
GTR000521847.6,
last updated:
2022-10-25
GTR000521847.5,
last updated:
2022-06-09
GTR000521847.4,
last updated:
2016-03-03
GTR000521847.3,
last updated:
2015-07-17
GTR000521847.2,
last updated:
2015-03-20
GTR000521847.1,
registered in GTR:
2015-03-18
Last annual review date for the lab: 2023-06-08
Past due
LinkOut
At a Glance
Test purpose:
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Risk Assessment
Conditions (1):
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Thrombophilia due to activated protein C resistance
Genes (1):
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F5 (1q24.2)
Methods (1):
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Molecular Genetics - Sequence analysis of the entire coding region: PCR with allele specific hybridization
Target population: Help
Not provided
Clinical validity:
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Not provided
Clinical utility:
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Predictive risk information for patient and/or family members
Ordering Information
Offered by:
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Specimen Source:
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- Isolated DNA
- Peripheral (whole) blood
- View specimen requirements
Who can order: Help
- Genetic Counselor
- Health Care Provider
- Licensed Physician
- Nurse Practitioner
Test Order Code:
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CPT codes:
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Contact Policy:
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Laboratory can only accept contact from health care providers. Patients/families are encouraged to discuss genetic testing options with their health care provider.
How to Order:
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Test service:
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Clinical Testing/Confirmation of Mutations Identified Previously
OrderCode: 1035
Genetic counseling
Result interpretation
OrderCode: 1035
Genetic counseling
Result interpretation
Test development:
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Test developed by laboratory but exempt from FDA oversight (eg. NYS CLEP approved, offered within a hospital or clinic)
Informed consent required:
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Based on applicable state law
Pre-test genetic counseling required:
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Decline to answer
Post-test genetic counseling required:
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Decline to answer
Recommended fields not provided:
Lab contact for this test,
Test strategy
Conditions
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Total conditions: 1
Condition/Phenotype | Identifier |
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Test Targets
Genes
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Total genes: 1
Gene | Associated Condition | Germline or Somatic | Allele (Lab-provided) | Variant in NCBI |
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Methodology
Total methods: 1
Method Category
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Test method
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Instrument *
Sequence analysis of the entire coding region
PCR with allele specific hybridization
* Instrument: Not provided
Clinical Information
Test purpose:
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Risk Assessment
Clinical utility:
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Recommended fields not provided:
Clinical validity,
Target population,
What is the protocol for interpreting a variation as a VUS?,
Is research allowed on the sample after clinical testing is complete?,
Sample negative report,
Sample positive report
Technical Information
Test Comments:
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Poor plasma anticoagulant response to activated protein C (APC resistance) is the most commonly observed inherited defect associated with thrombotic risk. The transition of guanine (G) to adenine (A) at position 1691 of the factor V gene causes substitution of glutamine for arginine at amino acid 506, resulting in Factor …
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Availability:
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Tests performed
Entire test performed in-house
Entire test performed in-house
Analytical Validity:
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Poor plasma anticoagulant response to activated protein C (APC resistance) is the most commonly observed inherited defect associated with thrombotic risk. The transition of guanine (G) to adenine (A) at position 1691 of the factor V gene causes substitution of glutamine for arginine at amino acid 506, resulting in Factor …
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Assay limitations:
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Analytical sensitivity is >99% for mutations within the coding sequence and intron/exon borders. Mutations that are outside the regions sequenced will not be detected. Rare polymorphisms within primer or probe regions may interfere with detection of gene variants. Clinical sensitivity for hemophilia B is > 99% for males and 97% …
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Proficiency testing (PT):
Is proficiency testing performed for this test?
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No
No
Recommended fields not provided:
Test Confirmation,
Citations to support assay limitations,
Description of internal test validation method,
Citations for Analytical validity,
PT Provider,
Description of PT method,
Major CAP category, CAP category, CAP test list
Regulatory Approval
FDA Review:
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Category:
FDA exercises enforcement discretion
NYS CLEP Approval:
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Number:
1340
Status: Approved
Status: Approved
Additional Information
Clinical resources:
Molecular resources:
Practice guidelines:
Consumer resources:
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NIH makes no endorsements of tests or laboratories listed in GTR. GTR is not a substitute for medical advice.
Patients and consumers
with specific questions about a genetic test should contact a health care provider or a genetics professional.