GTR Test Accession:
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GTR000592973.3
CAP
Last updated in GTR:
2024-04-04
View version history
GTR000592973.3,
last updated:
2024-04-04
GTR000592973.2,
last updated:
2024-04-04
GTR000592973.1,
registered in GTR:
2021-04-29
Last annual review date for the lab: 2024-04-04
LinkOut
At a Glance
Test purpose:
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Drug Response
Conditions (1):
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Disorder due cytochrome p450 CYP2D6 variant
Genes (1):
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CYP2D6 (22q13.2)
Methods (2):
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Molecular Genetics - Deletion/duplication analysis: RT-qPCR; ...
Target population: Help
Not provided
Clinical validity:
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Metabolism phenotype predictions based on genotyping known CYP2D6 variants can …
Clinical utility:
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Not provided
Ordering Information
Offered by:
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Specimen Source:
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- Buccal swab
- Peripheral (whole) blood
Who can order: Help
- Health Care Provider
- Licensed Physician
Test service:
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Custom Deletion/Duplication Testing
Custom Sequence Analysis
Result interpretation
Custom Sequence Analysis
Result interpretation
Test development:
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Test developed by laboratory (no manufacturer test name)
Informed consent required:
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Decline to answer
Pre-test genetic counseling required:
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Decline to answer
Post-test genetic counseling required:
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Decline to answer
Recommended fields not provided:
Test Order Code,
How to Order,
Lab contact for this test,
Contact policy,
Test strategy
Conditions
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Total conditions: 1
Condition/Phenotype | Identifier |
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Test Targets
Genes
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Total genes: 1
Gene | Associated Condition | Germline or Somatic | Allele (Lab-provided) | Variant in NCBI |
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Methodology
Total methods: 2
Method Category
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Test method
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Instrument *
Deletion/duplication analysis
RT-qPCR
Sequence analysis of select exons
Next-Generation (NGS)/Massively parallel sequencing (MPS)
* Instrument: Not provided
Clinical Information
Test purpose:
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Drug Response
Clinical validity:
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Metabolism phenotype predictions based on genotyping known CYP2D6 variants can predict as much as 50-60% of variation in urinary metabolic ratios using the drug Dextromethorphan (Gaedigk et al. 2008).
View citations (1)
- Del Tredici AL, Malhotra A, Dedek M, Espin F, Roach D, Zhu GD, Voland J, Moreno TA. Frequency of . Front Pharmacol. 2018;9:305. doi:10.3389/fphar.2018.00305. Epub 2018 Apr 05. PMID: 29674966.
Recommended fields not provided:
Clinical utility,
Target population,
What is the protocol for interpreting a variation as a VUS?,
Is research allowed on the sample after clinical testing is complete?,
Sample negative report,
Sample positive report
Technical Information
Availability:
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Tests performed
Entire test performed in-house
Entire test performed in-house
Analytical Validity:
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Analytical sensitivity and specificity are >99%.
Proficiency testing (PT):
Is proficiency testing performed for this test?
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Yes
Method used for proficiency testing: Help
Formal PT program
PT Provider: Help
American College of Medical Genetics / College of American Pathologists, ACMG/CAP
Yes
Method used for proficiency testing: Help
Formal PT program
PT Provider: Help
American College of Medical Genetics / College of American Pathologists, ACMG/CAP
Recommended fields not provided:
Test Confirmation,
Assay limitations,
Description of internal test validation method,
Citations for Analytical validity,
Description of PT method,
Major CAP category, CAP category, CAP test list
Regulatory Approval
FDA Review:
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Not provided
Additional Information
Reviews:
Clinical resources:
Molecular resources:
Practice guidelines:
Consumer resources:
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