GTR Test Accession:
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GTR000592979.2
Last updated in GTR: 2023-03-13
View version history
GTR000592979.2, last updated: 2023-03-13
GTR000592979.1, last updated: 2021-04-29
Last annual review date for the lab: 2023-04-07
Past due
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At a Glance
Test purpose:
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Diagnosis
Conditions (1):
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Familial hemophagocytic lymphohistiocytosis 3
Genes (1):
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UNC13D (17q25.1)
Methods (1):
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Molecular Genetics - Targeted variant analysis: PCR
Target population: Help
Not provided
Clinical validity:
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The UNC13D inversion accounted for 7% of mutant alleles in …
Clinical utility:
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Establish or confirm diagnosis
Ordering Information
Offered by:
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Specimen Source:
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- Buccal swab
- Peripheral (whole) blood
- View specimen requirements
Who can order: Help
- Health Care Provider
- Licensed Physician
How to Order:
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Test service:
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Custom Balanced Chromosome Rearrangement Studies
Result interpretation
Result interpretation
Test development:
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Test developed by laboratory (no manufacturer test name)
Informed consent required:
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Decline to answer
Pre-test genetic counseling required:
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Decline to answer
Post-test genetic counseling required:
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Decline to answer
Recommended fields not provided:
Test Order Code,
Lab contact for this test,
Contact policy,
Test strategy
Conditions
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Total conditions: 1
Condition/Phenotype | Identifier |
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Test Targets
Genes
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Total genes: 1
Gene | Associated Condition | Germline or Somatic | Allele (Lab-provided) | Variant in NCBI |
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Methodology
Total methods: 1
Method Category
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Test method
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Instrument *
Targeted variant analysis
PCR
* Instrument: Not provided
Clinical Information
Test purpose:
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Diagnosis
Clinical validity:
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The UNC13D inversion accounted for 7% of mutant alleles in a North American population of 79 patients diagnosed with FHL3 (Qian et al. 2014).
View citations (1)
- Qian Y, Johnson JA, Connor JA, Valencia CA, Barasa N, Schubert J, Husami A, Kissell D, Zhang G, Weirauch MT, Filipovich AH, Zhang K. The 253-kb inversion and deep intronic mutations in UNC13D are present in North American patients with familial hemophagocytic lymphohistiocytosis 3. Pediatr Blood Cancer. 2014;61(6):1034-40. doi:10.1002/pbc.24955. Epub 2014 Jan 28. PMID: 24470399.
Clinical utility:
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Establish or confirm diagnosis
View citations (1)
- Qian Y, Johnson JA, Connor JA, Valencia CA, Barasa N, Schubert J, Husami A, Kissell D, Zhang G, Weirauch MT, Filipovich AH, Zhang K. The 253-kb inversion and deep intronic mutations in UNC13D are present in North American patients with familial hemophagocytic lymphohistiocytosis 3. Pediatr Blood Cancer. 2014;61(6):1034-40. doi:10.1002/pbc.24955. Epub 2014 Jan 28. PMID: 24470399.
Recommended fields not provided:
Target population,
What is the protocol for interpreting a variation as a VUS?,
Is research allowed on the sample after clinical testing is complete?,
Sample negative report,
Sample positive report
Technical Information
Availability:
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Tests performed
Entire test performed in-house
Entire test performed in-house
Analytical Validity:
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During validation, no false negatives or false positive results were observed. Analytical specificity and sensitivity are >99%.
Proficiency testing (PT):
Is proficiency testing performed for this test?
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Yes
Method used for proficiency testing: Help
Alternative Assessment
Yes
Method used for proficiency testing: Help
Alternative Assessment
Recommended fields not provided:
Test Confirmation,
Assay limitations,
Description of internal test validation method,
Citations for Analytical validity,
PT Provider,
Description of PT method,
Major CAP category, CAP category, CAP test list
Regulatory Approval
FDA Review:
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Not provided
Additional Information
Reviews:
Clinical resources:
Molecular resources:
Consumer resources:
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