red blood cell plasmalogens
GTR Test Accession: Help GTR000070509.3
INHERITED DISEASEMETABOLIC DISEASEOPHTHALMOLOGY ... View more
Last updated in GTR: 2015-02-09
Last annual review date for the lab: 2021-09-15 Past due LinkOut
At a Glance
Diagnosis; Screening
Rhizomelic chondrodysplasia punctata type 1; Peroxisome biogenesis disorder; Rhizomelic chondrodysplasia punctata type 2 more...
Phytanic acid; Plasmalogen; Very long chain fatty acid
Biochemical Genetics - Analyte: Metabolite levels
rhizomelic chondrodysplasia punctata
Patients with low levels of red blood cell plasmalogens are …
Establish or confirm diagnosis
Ordering Information
Offered by: Help
Genetics Laboratory, Peroxisomal Disorders Section
View lab's website
View lab's test page
Test short name: Help
RBC plasmalogens
Specimen Source: Help
Who can order: Help
  • Genetic Counselor
  • Health Care Provider
  • Licensed Physician
  • Nurse Practitioner
  • Physician Assistant
  • Registered Nurse
Contact Policy: Help
Laboratory can only accept contact from health care providers. Patients/families are encouraged to discuss genetic testing options with their health care provider.
How to Order: Help
1.0 to 3.0 ml of whole EDTA blood sent at room temperature overnight to arrive Monday through Friday.
Order URL
Test service: Help
Clinical Testing/Confirmation of Mutations Identified Previously
Test development: Help
Test developed by laboratory but exempt from FDA oversight (eg. NYS CLEP approved, offered within a hospital or clinic)
Informed consent required: Help
No
Test strategy: Help
children with congenital cataracts, rhizomelic shortening, stippling, with or without increased plasma very long chain fatty acids, and with or without increased phytanic acid
View citations (3)
  • Braverman NE, Steinberg SJ, Fallatah W, Duker A, Bober MB. Rhizomelic Chondrodysplasia Punctata Type 1. 2001 Nov 16 [updated 2020 Jan 30]. In: Adam MP, Feldman J, Mirzaa GM, Pagon RA, Wallace SE, Amemiya A, editors. GeneReviews® [Internet]. Seattle (WA): University of Washington, Seattle; 1993-2024. PMID: 20301447.
  • Poll-The BT, Gärtner J. Clinical diagnosis, biochemical findings and MRI spectrum of peroxisomal disorders. Biochim Biophys Acta. 2012;1822(9):1421-9. doi:10.1016/j.bbadis.2012.03.011. Epub 2012 Mar 28. PMID: 22483868.
  • https://www.ncbi.nlm.nih.gov/books/NBK1270
Pre-test genetic counseling required: Help
Yes
Post-test genetic counseling required: Help
Yes
Recommended fields not provided:
Conditions Help
Total conditions: 4
Condition/Phenotype Identifier
Test Targets
Analytes Help
Total analytes: 3
Analyte Associated Condition
Methodology
Total methods: 1
Method Category Help
Test method Help
Instrument
Analyte
Metabolite levels
Agilent 6890 capillary gas chromatograph
Clinical Information
Test purpose: Help
Diagnosis; Screening
Clinical validity: Help
Patients with low levels of red blood cell plasmalogens are associated with defects in peroxisomal plasmalogen synthesis; confirmed by testing plasmalogen synthesis enzymes in cultured skin fibroblasts and mutation analyses in one of the three genes associated with RCDP and one of the more than 16 genes associated with the … View more
View citations (1)
  • Braverman NE, Moser AB. Functions of plasmalogen lipids in health and disease. Biochim Biophys Acta. 2012;1822(9):1442-52. doi:10.1016/j.bbadis.2012.05.008. Epub 2012 May 22. PMID: 22627108.
Clinical utility: Help
Establish or confirm diagnosis
View citations (1)
  • Braverman NE, Moser AB. Functions of plasmalogen lipids in health and disease. Biochim Biophys Acta. 2012;1822(9):1442-52. doi:10.1016/j.bbadis.2012.05.008. Epub 2012 May 22. PMID: 22627108.

Target population: Help
rhizomelic chondrodysplasia punctata
View citations (1)
  • Braverman NE, Moser AB. Functions of plasmalogen lipids in health and disease. Biochim Biophys Acta. 2012;1822(9):1442-52. doi:10.1016/j.bbadis.2012.05.008. Epub 2012 May 22. PMID: 22627108.
Variant Interpretation:
What is the protocol for interpreting a variation as a VUS? Help
If red blood cell plasmalogen content is slightly lower than normal and the red blood cells were prepared by an outside laboratory, then the results are in question.

Are family members with defined clinical status recruited to assess significance of VUS without charge? Help
No.

Will the lab re-contact the ordering physician if variant interpretation changes? Help
Yes. results of analysis of repeat specimen are reported by phone and faxed to the referring laboratory/physician
Sample reports:
Sample Negative Report Help
Sample Negative Report

Sample Positive Report Help
Sample Positive Report
Recommended fields not provided:
Technical Information
Test Procedure: Help
Preparation of washed red blood cells from whole EDTA blood. Extraction of red blood cells with hexane:isopropanol, centrifuge, dry the solvent layer, add 1.0N methanolic HCL, incubate at 75 deg C. for 2 hours, extract dimethylacetals with hexane , inject on 50meter DB-1 capillary column and measure 16:0, 18:0 and … View more
View citations (1)
  • Plasma and red blood cell fatty acids in peroxisomal disorders. Moser AB, et al. Neurochem Res. 1999;24(2):187-97. doi:10.1023/a:1022549618333. PMID: 9972864.
Test Confirmation: Help
All abnormal tests are confirmed by retesting a new aliquot of the original sample using two different capillary columns differing in polarity.
Test Comments: Help
In order to define the type of rhizomelic chondrodysplasia puncatata, biochemical testing of plasmalogen synthesis enzymes assays and phytanic acid oxidase are performed using cultured skin fibroblasts.
Availability: Help
Tests performed
Entire test performed in-house
Analytical Validity: Help
More than 100 control speciimens were tested to determine the range of normal; more than 25 samples from patients known to have peroxisomal plasmalogen synthesis defects were tested to determine the abnormal range. The same normal red blood cell control ( from Red Cross) and abnormal red blood cell ( … View more
Assay limitations: Help
Red blood cells prepared outside of our laboratory may not be washed and/or stored properly and may give falsely low levels of plasmalogens.
Proficiency testing (PT):
Is proficiency testing performed for this test? Help
Yes

Method used for proficiency testing: Help
Inter-Laboratory

PT Provider: Help
Biochemical Genetics Laboartory in Amsterdam

Description of PT method: Help
sample exchange

Description of internal test validation method: Help
The same normal red blood cell control ( from Red Cross) and abnormal red blood cell ( from dog blood) are assayed with each batch of samples. For the set of analyses to be valid the normal and abnormal must fall within the specified range (trend analysis).
VUS:
Software used to interpret novel variations Help
proprietary internal software

Laboratory's policy on reporting novel variations Help
call referring laboratory/physician and fax report, requesting a new sample
Recommended fields not provided:
Regulatory Approval
FDA Review: Help
Category: FDA exercises enforcement discretion
Additional Information

IMPORTANT NOTE: NIH does not independently verify information submitted to GTR; it relies on submitters to provide information that is accurate and not misleading. NIH makes no endorsements of tests or laboratories listed in GTR. GTR is not a substitute for medical advice. Patients and consumers with specific questions about a genetic test should contact a health care provider or a genetics professional.