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    CCDC182 coiled-coil domain containing 182 [ Homo sapiens (human) ]

    Gene ID: 101927581, updated on 14-Nov-2024

    Summary

    Official Symbol
    CCDC182provided by HGNC
    Official Full Name
    coiled-coil domain containing 182provided by HGNC
    Primary source
    HGNC:HGNC:49392
    See related
    Ensembl:ENSG00000166329 AllianceGenome:HGNC:49392
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Summary
    Predicted to be involved in female gonad development. [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See CCDC182 in Genome Data Viewer
    Location:
    17q22
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (57744495..57745299, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (58617754..58618558, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (55821856..55822660, complement)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene musashi RNA binding protein 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12445 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:55716402-55717204 Neighboring gene RNA, 7SL, cytoplasmic 449, pseudogene Neighboring gene ReSE screen-validated silencer GRCh37_chr17:55720638-55720787 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:55726383-55727192 Neighboring gene ReSE screen-validated silencer GRCh37_chr17:55740323-55740615 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:55741794-55742400 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8750 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:55753573-55754072 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:55785092-55785592 Neighboring gene RNA, U7 small nuclear 134 pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:55804275-55804774 Neighboring gene ReSE screen-validated silencer GRCh37_chr17:55805921-55806176 Neighboring gene ReSE screen-validated silencer GRCh37_chr17:55813992-55814170 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12446 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:55828159-55828658 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:55838959-55839579 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:55839580-55840199 Neighboring gene MPRA-validated peak2914 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8751 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:55887988-55888874 Neighboring gene RN7SK pseudogene 94 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr17:55910113-55910624 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr17:55910625-55911135 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:55911304-55911804 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:55923593-55924200 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:55927391-55927900 Neighboring gene mitochondrial ribosomal protein S23

    Genomic regions, transcripts, and products

    Phenotypes

    EBI GWAS Catalog

    Description
    Genome-wide association study of circulating estradiol, testosterone, and sex hormone-binding globulin in postmenopausal women.
    EBI GWAS Catalog

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    coiled-coil domain-containing protein 182
    Names
    coiled-coil domain-containing protein ENSP00000299415

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001282544.2NP_001269473.1  coiled-coil domain-containing protein 182

      See identical proteins and their annotated locations for NP_001269473.1

      Status: VALIDATED

      Source sequence(s)
      BE504978, EG357680, EG357681
      Consensus CDS
      CCDS62263.1
      UniProtKB/Swiss-Prot
      A6NF36
      Related
      ENSP00000299415.2, ENST00000299415.3
      Conserved Domains (1) summary
      pfam15835
      Location:1139
      DUF4715; Domain of unknown function (DUF4715)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

      Range
      57744495..57745299 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060941.1 Alternate T2T-CHM13v2.0

      Range
      58617754..58618558 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)