U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    DMRT1 doublesex and mab-3 related transcription factor 1 [ Chrysemys picta bellii (western painted turtle) ]

    Gene ID: 101944829, updated on 12-Jun-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    DMRT1
    Gene description
    doublesex and mab-3 related transcription factor 1
    See related
    Ensembl:ENSCPBG00000025458
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chrysemys picta bellii (sub-species: bellii)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See DMRT1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 6 NC_088796.1 (93356497..93443004, complement)
    102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) 6 NC_024223.1 (11237435..11323529)

    Chromosome 6 - NC_088796.1Genomic Context describing neighboring genes Neighboring gene doublesex and mab-3 related transcription factor 2 Neighboring gene doublesex and mab-3 related transcription factor 3 Neighboring gene KN motif and ankyrin repeat domains 1 Neighboring gene uncharacterized LOC122173748 Neighboring gene dedicator of cytokinesis 8

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Alternative splicing and thermosensitive expression of Dmrt1 during urogenital development in the painted turtle, Chrysemys picta. Mizoguchi B, et al. PeerJ, 2020. PMID 32219017, Free PMC Article
    2. Multivariate expression analysis of the gene network underlying sexual development in turtle embryos with temperature-dependent and genotypic sex determination. Valenzuela N. Sex Dev, 2010. PMID 20110645

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in germ cell development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sex differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    doublesex- and mab-3-related transcription factor 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1138683v2

    Genomic

    1. NC_088796.1 Reference ASM1138683v2

      Range
      93356497..93443004 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005296762.4 → XP_005296819.1  doublesex- and mab-3-related transcription factor 1 isoform X1

      UniProtKB/TrEMBL
      A0A6H0DVH8, A0A8C3IMD9, A0A8C3IS47
      Related
      ENSCPBP00000036668.1
      Conserved Domains (2) summary
      pfam00751
      Location:60 → 106
      DM; DM DNA binding domain
      pfam12374
      Location:118 → 191
      Dmrt1; Double-sex mab3 related transcription factor 1

    2. XM_065550436.1 → XP_065406508.1  doublesex- and mab-3-related transcription factor 1 isoform X2

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.