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    ST3GAL8 ST3 beta-galactoside alpha-2,3-sialyltransferase 8 [ Latimeria chalumnae (coelacanth) ]

    Gene ID: 102358544, updated on 6-Jun-2024

    Summary

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    Gene symbol
    ST3GAL8
    Gene description
    ST3 beta-galactoside alpha-2,3-sialyltransferase 8
    See related
    Ensembl:ENSLACG00000018892
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Latimeria chalumnae
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
    Orthologs
    zebrafish all
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    Genomic context

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    See ST3GAL8 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 10 NC_088148.1 (47896111..47921471, complement)
    101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819015.1 (5159034..5182453, complement)

    Chromosome 10 - NC_088148.1Genomic Context describing neighboring genes Neighboring gene fer-1 like family member 4 Neighboring gene un-named sa1614 Neighboring gene cytochrome c1, heme protein, mitochondrial Neighboring gene small ribosomal subunit protein eS8-like Neighboring gene ERGIC and golgi 3 Neighboring gene reactive oxygen species modulator 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables beta-galactoside (CMP) alpha-2,3-sialyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ganglioside biosynthetic process via lactosylceramide IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sialylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ST3 beta-galactoside alpha-2,3-sialyltransferase 8
    Names
    alpha2,3-sialyltransferase
    NP_001303808.1
    XP_014342562.1
    XP_064420153.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001316879.1 → NP_001303808.1  ST3 beta-galactoside alpha-2,3-sialyltransferase 8

      Status: PROVISIONAL

      Source sequence(s)
      HG531974
      UniProtKB/TrEMBL
      A0A0F7RQ79
      Conserved Domains (1) summary
      pfam00777
      Location:79 → 332
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fLatCha1.pri

    Genomic

    1. NC_088148.1 Reference fLatCha1.pri

      Range
      47896111..47921471 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_064564083.1 → XP_064420153.1  ST3 beta-galactoside alpha-2,3-sialyltransferase 8 isoform X1

      UniProtKB/TrEMBL
      H3BHX7

    2. XM_014487076.2 → XP_014342562.1  ST3 beta-galactoside alpha-2,3-sialyltransferase 8 isoform X1

      UniProtKB/TrEMBL
      H3BHX7
      Related
      ENSLACP00000021498.2
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases