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    LOC107873096 superoxide dismutase [Fe], chloroplastic [ Capsicum annuum ]

    Gene ID: 107873096, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC107873096
    Gene description
    superoxide dismutase [Fe], chloroplastic
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Capsicum annuum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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    Genomic context

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    See LOC107873096 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    101 current UCD10Xv1.1 (GCF_002878395.1) 3 NC_061113.1 (118357683..118366925, complement)
    100 previous assembly Pepper Zunla 1 Ref_v1.0 (GCF_000710875.1) 6 NC_029982.1 (66084054..66093174)

    Chromosome 3 - NC_061113.1Genomic Context describing neighboring genes Neighboring gene cysteine-rich receptor-like protein kinase 2 Neighboring gene ATP synthase subunit delta', mitochondrial-like Neighboring gene probable BOI-related E3 ubiquitin-protein ligase 3 Neighboring gene probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables superoxide dismutase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in superoxide metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast nucleoid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    superoxide dismutase [Fe], chloroplastic
    Names
    iron superoxide dismutase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Capsicum annuum Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCD10Xv1.1 Primary Assembly

    Genomic

    1. NC_061113.1 Reference UCD10Xv1.1 Primary Assembly

      Range
      118357683..118366925 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016719821.2 → XP_016575307.1  superoxide dismutase [Fe], chloroplastic isoform X2

      UniProtKB/TrEMBL
      A0A1U8GVN6
      Conserved Domains (1) summary
      PLN02685
      Location:1 → 296
      PLN02685; iron superoxide dismutase

    2. XM_016719822.2 → XP_016575308.1  superoxide dismutase [Fe], chloroplastic isoform X3

      UniProtKB/TrEMBL
      A0A1U8H2K8

    3. XM_047408258.1 → XP_047264214.1  superoxide dismutase [Fe], chloroplastic isoform X1

    Nucleotide Protein
    Heading Accession and Version

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