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    bsna bassoon presynaptic cytomatrix protein a [ Megalops cyprinoides (Indo-Pacific tarpon) ]

    Gene ID: 118780182, updated on 20-Mar-2024

    Summary

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    Gene symbol
    bsna
    Gene description
    bassoon presynaptic cytomatrix protein a
    See related
    EnsemblRapid:ENSMCNG00005023900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Megalops cyprinoides
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Elopiformes; Megalopidae; Megalops
    Orthologs
    zebrafish all
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    Genomic context

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    See bsna in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    100 current fMegCyp1.pri (GCF_013368585.1) 7 NC_050589.1 (22174877..22302305)

    Chromosome 7 - NC_050589.1Genomic Context describing neighboring genes Neighboring gene helicase ARIP4-like Neighboring gene BRCA1 associated deubiquitinase 1 Neighboring gene acylamino-acid-releasing enzyme-like Neighboring gene toll-like receptor 9

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_050589.1 Chromosome 7 Reference fMegCyp1.pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of presynaptic active zone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in presynaptic active zone assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in GABA-ergic synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoskeleton of presynaptic active zone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in glutamatergic synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein bassoon

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Megalops cyprinoides Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fMegCyp1.pri Primary Assembly

    Genomic

    1. NC_050589.1 Reference fMegCyp1.pri Primary Assembly

      Range
      22174877..22302305
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036532543.1 → XP_036388436.1  protein bassoon isoform X1

      Conserved Domains (4) summary
      PHA03247
      Location:308 → 716
      PHA03247; large tegument protein UL36; Provisional
      cd15771
      Location:164 → 223
      FYVE1_BSN_PCLO; FYVE-related domain 1 found in protein bassoon and piccolo
      cd15772
      Location:531 → 593
      FYVE2_BSN_PCLO; FYVE-related domain 2 found in protein bassoon and piccolo
      NF033761
      Location:4166 → 4234
      gliding_GltJ; adventurous gliding motility protein GltJ

    2. XM_036532544.1 → XP_036388437.1  protein bassoon isoform X1

      Conserved Domains (4) summary
      PHA03247
      Location:308 → 716
      PHA03247; large tegument protein UL36; Provisional
      cd15771
      Location:164 → 223
      FYVE1_BSN_PCLO; FYVE-related domain 1 found in protein bassoon and piccolo
      cd15772
      Location:531 → 593
      FYVE2_BSN_PCLO; FYVE-related domain 2 found in protein bassoon and piccolo
      NF033761
      Location:4166 → 4234
      gliding_GltJ; adventurous gliding motility protein GltJ

    3. XM_036532541.1 → XP_036388434.1  protein bassoon isoform X1

      Conserved Domains (4) summary
      PHA03247
      Location:308 → 716
      PHA03247; large tegument protein UL36; Provisional
      cd15771
      Location:164 → 223
      FYVE1_BSN_PCLO; FYVE-related domain 1 found in protein bassoon and piccolo
      cd15772
      Location:531 → 593
      FYVE2_BSN_PCLO; FYVE-related domain 2 found in protein bassoon and piccolo
      NF033761
      Location:4166 → 4234
      gliding_GltJ; adventurous gliding motility protein GltJ

    4. XM_036532545.1 → XP_036388438.1  protein bassoon isoform X1

      Related
      ENSMCNP00005062550.1, ENSMCNT00005063636.1
      Conserved Domains (4) summary
      PHA03247
      Location:308 → 716
      PHA03247; large tegument protein UL36; Provisional
      cd15771
      Location:164 → 223
      FYVE1_BSN_PCLO; FYVE-related domain 1 found in protein bassoon and piccolo
      cd15772
      Location:531 → 593
      FYVE2_BSN_PCLO; FYVE-related domain 2 found in protein bassoon and piccolo
      NF033761
      Location:4166 → 4234
      gliding_GltJ; adventurous gliding motility protein GltJ

    5. XM_036532546.1 → XP_036388439.1  protein bassoon isoform X2

      Conserved Domains (4) summary
      PHA03247
      Location:149 → 557
      PHA03247; large tegument protein UL36; Provisional
      cd15771
      Location:5 → 64
      FYVE1_BSN_PCLO; FYVE-related domain 1 found in protein bassoon and piccolo
      cd15772
      Location:372 → 434
      FYVE2_BSN_PCLO; FYVE-related domain 2 found in protein bassoon and piccolo
      NF033761
      Location:4007 → 4075
      gliding_GltJ; adventurous gliding motility protein GltJ
    Nucleotide Protein
    Heading Accession and Version