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DRX506743: PromethION sequencing of SAMD00665343
1 OXFORD_NANOPORE (PromethION) run: 53,164 spots, 644.8M bases, 535.9Mb downloads

Submitted by: National Agriculture and Food Research Organization (National Agriculture and Food Research Organizatio)
Study: Burkholderia gladioli strain:MAFF301064 Genome sequencing and assembly
PRJDB17079 • DRP012119 • All experiments • All runs
show Abstracthide Abstract
The Burkholderia gladioli strain MAFF301064, originally isolated from freesia, is a culture collection deposited in the Genebank project at National Agriculture and Food Research Organization. This strain is reported to exhibit biocontrol activity against the rice grain rot pathogen Burkholderia glumae and the rice seedling blight pathogen Burkholderia plantarii. To analyze the gene functions of B. gladioli MAFF301064, we sequenced its genome using a Nanopore PromethION sequencer, assembled it with Dragonflye, and annotated the genes using the D-FAST pipeline.
Sample: Burkholderia gladioli strain MAFF301064
SAMD00665343 • DRS419932 • All experiments • All runs
Organism: Burkholderia gladioli
Library:
Name: M1064
Instrument: PromethION
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: SINGLE
Construction protocol:
Runs: 1 run, 53,164 spots, 644.8M bases, 535.9Mb
Run# of Spots# of BasesSizePublished
DRR52285753,164644.8M535.9Mb2024-10-09

ID:
35555064

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