HiSeq X Five paired end sequencing of SAMD00554060 - SRA

DRX401856: HiSeq X Five paired end sequencing of SAMD00554060
1 ILLUMINA (HiSeq X Five) run: 1.2M spots, 365.7M bases, 131.4Mb downloads

Submitted by: National Institute of Infectious Diseases - Japan (NIID)

Study: Whole-genome sequencing carbapenemase-producing isolates from hospital sewage

Carbapenemase-producing organisms isolated from hospital sewage water at a hospital were analyzed by whole-genome sequencing.

Sample: Aeromonas dhakensis 9KHC3 isolated from hospital sewage

Library:

Name: Illumina library of SAMD00554060

Instrument: HiSeq X Five

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Enzymatics-Nextera XT

Spot descriptor:

1 forward152 reverse

Step	Prev Step
1	NIL

Runs: 1 run, 1.2M spots, 365.7M bases, 131.4Mb

Run	# of Spots	# of Bases	Size	Published
DRR416289	1,211,086	365.7M	131.4Mb	2023-10-03

Supplemental Content

SAMD00554060 (1)
SRA
Piper mutabile isolate HCY-37 18S ribosomal RNA gene, partial sequence; internal...
Piper mutabile isolate HCY-37 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence
gi|593023656|gb|KF924123.1|

Nucleotide
Homo sapiens oxoglutarate receptor 1 (OXGR1), transcript variant 5, mRNA
Homo sapiens oxoglutarate receptor 1 (OXGR1), transcript variant 5, mRNA
gi|1890341705|ref|NM_080818.5|

Nucleotide
APL1 Apl1p [Saccharomyces cerevisiae S288C]
APL1 Apl1p [Saccharomyces cerevisiae S288C]
Gene ID:853461

Gene
YJR005W[gene name] AND Saccharomyces cerevisiae[organism] AND (al... (1)
YJR005W[gene name] AND Saccharomyces cerevisiae[organism] AND (alive[prop])
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