U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ERX9737532: Illumina HiSeq 2500 sequencing; Raw reads: P8403_408
1 ILLUMINA (Illumina HiSeq 2500) run: 8.1M spots, 413.2M bases, 147.7Mb downloads

Design: unspecified
Submitted by: Swedish University of Agricultural Sciences
Study: Sequencing of sRNAs from oomycetes species with different lifestyles, inluding plant pathogens and biocontrol organisms
show Abstracthide Abstract
Small RNAs were sequenced from the oomycetes Lagenidium giganteum, Phytophthora cactorum, Ph. colocasiae, Ph plurivora, Pythium oligandrum and Py. periplocum. Their characteristics, including 5' prime preference, length and mapping sites, were analysed and used to formulate the hypotheses regarding the role of RNA silencing in the respective organisms. Clonostachys rosea sRNAs were used as outgroup.
Sample: P8403_408
SAMEA111348563 • ERS13446110 • All experiments • All runs
Library:
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM PCR
Layout: SINGLE
Runs: 1 run, 8.1M spots, 413.2M bases, 147.7Mb
Run# of Spots# of BasesSizePublished
ERR102021408,101,060413.2M147.7Mb2022-11-26

ID:
25412697

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...