Mapped reads for uncultivated Cytophagales bacterium UBA11617 genome ... - SRA

SRX3577711: Mapped reads for uncultivated Cytophagales bacterium UBA11617 genome recovered from ERX552299
1 ILLUMINA (Illumina HiSeq 2000) run: 303,075 spots, 60.1M bases, 29.1Mb downloads

Design: Reads from ERX552299 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA11617 genome.

Submitted by: University of Queensland

Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.

PRJNA417962 • SRP130174 • All experiments • All runs

show Abstracthide Abstract

Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.

Sample: Uncultivated Cytophagales bacterium UBA11617 genome recovered from ERX552299

SAMN08019970 • SRS2847440 • All experiments • All runs

Organism: Cytophagales bacterium

Library:

Name: UBA11617_library

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 303,075 spots, 60.1M bases, 29.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR6488084	303,075	60.1M	29.1Mb	2018-02-23

ID:: 4963213

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity