GSM3937972: X2_7dS_rep3; Schmidtea mediterranea; RNA-Seq - SRA

SRX6431240: GSM3937972: X2_7dS_rep3; Schmidtea mediterranea; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 65M spots, 3.3G bases, 2Gb downloads

Submitted by: NCBI (GEO)

Study: Transcriptional profile of planarian FACS populations at different nutritional status

PRJNA554096 • SRP214257 • All experiments • All runs

show Abstracthide Abstract

We performed RNA-seq of X1, X2 and Xins subfractions at 1 day of starvation (1dS), 7days of starvation (7dS) and 30days of starvation (30dS) Overall design: The overall aim of this work was to characterize the transcriptional profile of stem cells (X1) at different nutritional status.

Sample: X2_7dS_rep3

SAMN12255278 • SRS5086144 • All experiments • All runs

Organism: Schmidtea mediterranea

Library:

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Construction protocol: RNA was harvested from FACS sorted cells using Trizol LS reagent. RNA libraries were prepared for sequencing using standard Illumina protocols

Experiment attributes:

GEO Accession: GSM3937972

Links:

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 65M spots, 3.3G bases, 2Gb

Run	# of Spots	# of Bases	Size	Published
SRR9670764	64,953,690	3.3G	2Gb	2021-04-26

ID:: 8521348

SRA

Sequence Read Archive

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