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SRX7350990: Whole genome shotgun sequencing of FSIS11926997 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 572,037 spots, 276.3M bases, 151.1Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)
Study: FSIS NARMS Salmonella
PRJNA292666 • SRP062916 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of foodborne pathogens as part of the US Department of Agriculture surveillance project for NARMS.
Sample:
SAMN13542972 • SRS5810495 • All experiments • All runs
Organism: Salmonella enterica subsp. enterica serovar Johannesburg
Library:
Name: FSIS11926997 Nextera XT shotgun library
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for FSIS11926997.
Spot descriptor:
1  forward251  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.54
Runs: 1 run, 572,037 spots, 276.3M bases, 151.1Mb
Run# of Spots# of BasesSizePublished
SRR10673620572,037276.3M151.1Mb2019-12-12

ID:
9633844

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