Illlumina sequencing of Batrachochytrium salamandrivorans isolate AMF... - SRA

SRX7862253: Illlumina sequencing of Batrachochytrium salamandrivorans isolate AMFP15/3
1 ILLUMINA (Illumina HiSeq 3000) run: 47.8M spots, 14.4G bases, 5.9Gb downloads

Design: Genomic DNA was isolated using yeast protocol for Qiagen 100G genomic tips and checked using the Qubit dsDNA HS Assay Kit. NxtGnt (NXTGNT Ghent University, Faculty of Pharmaceutical Sciences, Ottergemsesteenweg 460, B-9000 Gent, Belgium) performed the library preparation using the NEBNext Ultra II kit, using dual indexes and 6 PCR cycles followed by sequencing on one lane of a Hiseq PE150 Illumina machine

Submitted by: Ghent University

Study: Batrachochytrium salamandrivorans diversity

PRJNA610831 • SRP251868 • All experiments • All runs

show Abstracthide Abstract

Sequencing of seven isolates from five outbreaks within the European outbreak of Batrachochytrium salamandrivorans, aiming to characterize diversity and epidemiological patterns.

Sample:

SAMN14316980 • SRS6271144 • All experiments • All runs

Organism: Batrachochytrium salamandrivorans

Library:

Name: AMFP15/3.il

Instrument: Illumina HiSeq 3000

Strategy: WGS

Source: GENOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 47.8M spots, 14.4G bases, 5.9Gb

Run	# of Spots	# of Bases	Size	Published
SRR11252127	47,777,884	14.4G	5.9Gb	2021-10-17

ID:: 10290098

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